Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dere10g0561 ATGGTTGGAATTGGAGGGGCAATGGTTATGACTTTCGTAAAAGGTCCGTACATTAACATTTGGCCTTCTCACATGCTTCCACGTCATCACCACCCCAATGCCCACGTGGCACACCACAACGACATTGCACGTCAGGTTTTGGGTGTCGTTTGTGCTTTTGGAAGCTGCTTCGCTTACGCTTTCTGGCTCATCCTTCAGGGTATGATGAGCAGAAGTGGTGATGAGTATCCGAGCCATAACACAAATACAGCATTGATGTCTGCAATGGCAGCAATACAATCCACAGCTTTTGGTCTTTGCGTTGAAAGGGATTGGAGGCAGTGGAAATTGGGTTGGAATATCAGGCTTCTAACTGTCGTTTATTCAGGAGTTGTGGCCTCTGGATTGATGGTGGCAGGGATAGCATGGTGTGTGGAGAAGAGGGGCCCACTGTTTGTGTCAGTGTTCAGCCCTTTTCTGCTTTTGTTTGTGGCCATTGCCAGTTCTTTCATTTTAGATGAGAAGCTCTTCATTGGAAGTTTGGTGGGAGCAGTGTTGATAGTGTGTGGACTGTACATGGTGCTGTGGGGTAAAGGAAAAGAGGCCAAAAACGTTAAGACTCAACCAGCTCCAGACTTGCCCTTACATGATCATAAAAGTGATCACTTTAATGACTCTAAGGATCAAAAACATGATGAAGATAGTAATGCTAAAGAGAAACAAGAAGAGGTAGTTTCTAGCAATGTCTAA 729 0.4513 MVGIGGAMVMTFVKGPYINIWPSHMLPRHHHPNAHVAHHNDIARQVLGVVCAFGSCFAYAFWLILQGMMSRSGDEYPSHNTNTALMSAMAAIQSTAFGLCVERDWRQWKLGWNIRLLTVVYSGVVASGLMVAGIAWCVEKRGPLFVSVFSPFLLLFVAIASSFILDEKLFIGSLVGAVLIVCGLYMVLWGKGKEAKNVKTQPAPDLPLHDHKSDHFNDSKDQKHDEDSNAKEKQEEVVSSNV 242
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dere10g0561 242 Pfam EamA-like transporter family 47 188 IPR000620 GO:0016020
Dere10g0561 242 PANTHER WAT1-RELATED PROTEIN 2 201 IPR030184 GO:0016020|GO:0022857
Dere10g0561 242 MobiDBLite consensus disorder prediction 205 234 - -
Dere10g0561 242 MobiDBLite consensus disorder prediction 199 242 - -
Dere10g0561 242 SUPERFAMILY Multidrug resistance efflux transporter EmrE 105 193 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dere10g0561 Dere-ChrDere10 10175603 10179386 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dere10g0561 1 237 Nodulin-like Gene Family AT1G25270 38.494 9.31e-52 170