Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dere10g0541 ATGGAGGCTGTCAAGCGGAAGCGCGCCAAGCCCAAGCTCGAGCGCCGAAACGCCATGAAGAATATCGATTACCGAGCTCCCTCCTCTTTTGCTTCATTCGACGATACCTCCCCCGATTTTCGATCTTCATCATCCCTCGATCTGTCCCCTTCTCTAGAGAATGAAACCAGCTTGCGTGTGCAGGGCATCGAGGGCGAATTCGACCTAATTTTCCGCAATCTTGGCCTTTCTGGCCCAGACGACTTTGCTATTCCAACTGCTGACTGGGAAGCCCAGAAGTCTCGCTATAGAATTAGTACTAAATCGTTGGATAAGAAGGTGGAGGATGAGATTTCAGTGAAGCTTGAATCTAGGGTTTCGCTTGACAGTGATGTTGAGGTGCCTCGTCAGGAGGGGAAGTTTGGGAAGCCTGATTTTCCTTCCGGTTCAAAGCCTCTGGGGGGCGGGGGAATCAAGGGTGTTAGGCCTCCCGTTCTGTCACCGCCGCCGGTGATGTTGCCGCCGATTGCTGATGATAAGATATCTACTTGGGATTTACTGAGGTCTTTATCGGACGGTGTTGTTAATTCACCGATTCATAATGAGGGCATAAGTTCTCCGGGTGAGGACGATGAAAGGCGTGTGGAAGAAAATGAAGGGGGTGATCAAGTAATTGATAGTGAGGAAGAGTTTCATGGTGTGAGACATGGGGAGAGGAATCTTCTTTCAGATTCTAGTTCATCTGTTTCTCATGATGACAATGAAAGCGATGCTGGTGGTTGTAAGGTTTCTAGTGTGGTTGACGATTCGGTTTATAATGTCTCACCGAATGGTTCGTTTAGACGCCTTTTTAACTCGTGGCAAAAGGGTGAGATTTTGGGAAAGGGTTCGTTTGGTACGGTGTATGAAGGCTTCACAGATGATGGATTCTTTTTTGCGGTAAAGGAGGTGTCTTTGCTGGATCAAGGAAGCCAGGGAAAACAGAGCATTTTCCAACTTCAGCAGGAAATATCTCTTTTGAGTCAATTTGAACACGAGAACATTGTTCGATATCTTGGCACGGACAAGGACAAAAGTACGCTGTACATCTTCCTTGAGCTTGTAACTAAAGGATCATTGGCAAGACTCTATCAAAAGTATCGTCTAAGGGATTCTCAAGTTTCATCATACACAAGGCATATTTTAAGTGGCTTAAAGTATCTCCATGATCGTAATGTGGTTCACAGGGACATCAAGTGTGCTAATATATTGGTTGACGCAAATGGGTCAGTAAAGCTTGCTGATTTTGGGTTAGCCAAGGCAACCAGTATGAATGATATTAAATCAAGCAAAGGCTCCCCATATTGGATGGCCCCTGAGGTTGTAAATTTAAGAAGCCGTGGTTATGGGCGAGCAGCTGATATATGGAGCTTGGGATGTACAGTTTTGGAGATGTTGACACAGCAGCCTCCTTACTCTCATTTGGAAGGAATGCAAGCATTATTTCGGATTGGTAGAGGTGAACCTCCTCCTGTTCCAGAATTTTTGTCAAAAGATGCTCGAGATTTCATTCTCAAGTGCCTACAAGTTAACCCAAATAATAGGCCAGCTGCAGTCCAGTTATTGGATCATCCGTTTGTAAAGAGGCCATTCCTATCCCCTATGAGTCCTGCTTCTCCGCATCTTAATGCATACCCGGGGACCAGTGGGATATACATGGAAAGGTTACTAGGCATGCAGATATCTACCGAGCCAGGCGATTCAATCTTCAGCTAG 1734 0.4591 MEAVKRKRAKPKLERRNAMKNIDYRAPSSFASFDDTSPDFRSSSSLDLSPSLENETSLRVQGIEGEFDLIFRNLGLSGPDDFAIPTADWEAQKSRYRISTKSLDKKVEDEISVKLESRVSLDSDVEVPRQEGKFGKPDFPSGSKPLGGGGIKGVRPPVLSPPPVMLPPIADDKISTWDLLRSLSDGVVNSPIHNEGISSPGEDDERRVEENEGGDQVIDSEEEFHGVRHGERNLLSDSSSSVSHDDNESDAGGCKVSSVVDDSVYNVSPNGSFRRLFNSWQKGEILGKGSFGTVYEGFTDDGFFFAVKEVSLLDQGSQGKQSIFQLQQEISLLSQFEHENIVRYLGTDKDKSTLYIFLELVTKGSLARLYQKYRLRDSQVSSYTRHILSGLKYLHDRNVVHRDIKCANILVDANGSVKLADFGLAKATSMNDIKSSKGSPYWMAPEVVNLRSRGYGRAADIWSLGCTVLEMLTQQPPYSHLEGMQALFRIGRGEPPPVPEFLSKDARDFILKCLQVNPNNRPAAVQLLDHPFVKRPFLSPMSPASPHLNAYPGTSGIYMERLLGMQISTEPGDSIFS 577
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dere10g0541 577 MobiDBLite consensus disorder prediction 1 20 - -
Dere10g0541 577 ProSitePatterns Serine/Threonine protein kinases active-site signature. 399 411 IPR008271 GO:0004672|GO:0006468
Dere10g0541 577 SMART serkin_6 280 533 IPR000719 GO:0004672|GO:0005524|GO:0006468
Dere10g0541 577 ProSiteProfiles Protein kinase domain profile. 280 533 IPR000719 GO:0004672|GO:0005524|GO:0006468
Dere10g0541 577 MobiDBLite consensus disorder prediction 188 254 - -
Dere10g0541 577 FunFam Mitogen-activated protein kinase 1, putative, expressed 278 546 - -
Dere10g0541 577 Pfam Protein kinase domain 281 533 IPR000719 GO:0004672|GO:0005524|GO:0006468
Dere10g0541 577 PANTHER MAP KINASE KINASE KINASE SSK2-RELATED-RELATED 140 537 - -
Dere10g0541 577 MobiDBLite consensus disorder prediction 129 152 - -
Dere10g0541 577 MobiDBLite consensus disorder prediction 233 247 - -
Dere10g0541 577 MobiDBLite consensus disorder prediction 198 232 - -
Dere10g0541 577 MobiDBLite consensus disorder prediction 30 53 - -
Dere10g0541 577 Gene3D Transferase(Phosphotransferase) domain 1 278 547 - -
Dere10g0541 577 SUPERFAMILY Protein kinase-like (PK-like) 276 554 IPR011009 -
Dere10g0541 577 MobiDBLite consensus disorder prediction 28 53 - -
Dere10g0541 577 ProSitePatterns Protein kinases ATP-binding region signature. 286 308 IPR017441 GO:0005524
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dere10g0541 Dere-ChrDere10 9931689 9935939 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dere10g0541 12 537 MAP Kinase Kinase Kinase AT4G08500 46.599 7.94e-145 430
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK STE_STE11 Dere10g0541 Pkinase 4.8e-69 CL0016