Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dere10g0493 ATGGCAACTAGAACAAATGAAGGGTCTTCTTCATCTTCTTCTGATTCAACTCGTCAATGGAAGTACCATACTTTCCTGAGTTTCAGAGGGGAAGACACCAGAAAAAGCTTCACAGACCACTTGTACGCTACTTTACAACGAAAGGGAATCATAGCTTTTAAGGATGACCAAGAGCTTGAAAGAGGACAAGTTATCAAACAGAGTCTCCTTCAAGCCATCGAAGAATCTTTCTCTGCAGTTGTCATCCTCTCCCCAGATTATGCTTCTTCAACATGGTGTTTGGATGAACTCATAGAGATTCTTCGTTGTAGGAGAGAGTTGGGCCTTCTGGTGTTTCCAATCTTCTATGGTGTTGATCCATCCAATATTCGGCATCAAAGGGGAAGTTTTGCAGAAGCATTTGAAAAACATGAAGAAAAATTTATACATGACAAGAAGAAGGTGCAAACATGGAGGGATGCATTGCAGGAAGTTGCAAATCTGTCTGGTTGGGACTCTGAAAATTGGCGTGAAACAAAACTTATTGATCACATTATTGAAACACTATGGTCAAAACTACGTTATGCACTGCCTTCTGACTCTGATATATTAGTTGGAGTCGAATCAAAGATAGCAGAAATGGATTCACTTGTTGCAAATCGACAGGACAGTGTTCAGTTTATAGGAATATGGGGCATGGGAGGCATAGGCAAAACTACTCTTGCAAGAGTTGTCTATGAGCGAATACAAGGAGACTTTGAAGTTCATTGCTTTCTCCCTAATGTTAGAGAGTTATCTGGAAAAGATGGTTTGATTTCCTTGCAAAGAAAAATTCTTTCTCGTATGAATATAAGAAATGTGGAAGTTGATGATTGTGATGAAGGAAGGAAGTTGATAAAGAACATTTTATGCAACAGAAAAGTCTTACTTATCCTTGATGATGTGAGTGAAATAAGCCAACTCGAGAATTTGGCAGGAAATCACGGATGGTTTGGTCGAGGAAGTAGGATAATTATAACAACGAGAGATATGCATTTGTTGTCATTGCATGGTGTGTCTTCTCAGTATGAGATCAAACTCTTAAGTAACTATGAATCTCTTCAACTTTTTTGCAAAAAAGCTTTTAAAGGAGATCAACCGAAGGAAGATTATTTGGAGCTTTCTAGATCTGTGATTGAATATGCTGGAGGCCTTCCTTTGGCTCTCAAAGTGTTAGGTTCATTTCTATGTGGAAAAGCTATATTGGAGTGGAATGATGCATTGGCTAAGTTAAGCAGGTTTCTTCCAAATGATATTTTGAAGATACTTAAAGTGAGTTTTGATGGATTAGACGATGATGAGAAGACTATATTTCTGGATATTGCTTGCTTTTTTAAGGGGATGGACACCGAAAGTGTCATACAAATTCTACAATATTGTGGTCTTCATGCGATAATTGGAATAAAAGTTCTTATTGATAAGTCATTGATAACTAATTCTAATGGCAACTTGGAGATGCATGATTTGCTTCAAGAAATGGGTAAGAATATTGTTTCACAAGAATCCCCCAATGATGCTAGCAAGCGCAGTAGGTTATGGTCTTTGGAGGATGCTAATAAAGTACTAGAGAAAAATAACGGAACAGAAGCTATCCAAGGTATAGTTCTAACATTAGTGAAATCATATGAGGCATATTGGGACCCTGAAGCCTTCTCAAAGATGAGTAGTCTCAGGTTACTTATCATATCAAGTCATTTGCATCTTCCTCGATGCCATTTGAATCTTCCTCATGGACTTAAATGCCTTTCCAACACAATAAAAGTCCTGCAATGGGAGGGATGTCCTTTAGATGCTCTTCCAGGTCAAGTTTCACTGGATGAACTTGTTGATCTTAAGATGCAACTTAGCAAGTTAAAACAACTTTGGAGAGGAACCCAGCTTCTGAGAAGGCTTACATCCATCGATTTAAGTCATTCGAGATATCTAATCAAGACGCCAAATTTCGATGAAATCCCTAATCTGCAAAAGATCATTCTCGAAGGTTGTATAAACCTTGTTGAAGTTCACTCCTCTCTTGGGCGCCATAAGAACCTTGTCATAGTTAATTTGAAGGATTGCAAGAGTATGAAAGCCTTACCAAGTAAGCTTGAGATGAATAGCCTAGAGACTTTTATACTCTCAGGTTGTTCAAAAGTCAGAAAGCTTCCTGAGTTTGGCAAGACTATGAAACATCTATACACGTTTAATTTAGAGGAGACTGGCATAGCCAAACTACCTGAATCACTAATCAATTTGTCTGGTCTTGCTGTTCTGAATCTAAGAAATTGCAAGAATCTAATTTGCCTACCAAATGTGATTCAGTATATGAAATGTATCAGAGTCATAAACTTTTCTGGGTGCTCAAAATTCTCAAGAATGCCGGACATTTCAAATGAAAATGTGGCTTTGGAAGAGCTTGATGCTAGTGGAACTGCCATAAAAGAAGTGCCTTCGTCCATCCTTCATTTGATAAACATGAAAATGCTCTCTTTTAGGGGATGCACTGGACAAGCACAATCATCATCATCATCATGGAATTTACCATCTTTTATCAAGTGGGTTTTTATGCTTCAAAGGCCTTCAATATCCACTGGGTTAATGCTTCCTCCTTCTTTATCAAGTCTATCATCTTTGAAGGAACTAGATTTAAGTCACTGCAATCTCTGTGACGAGTCTCTTCCCAATGATCTCAACAGGTTATCTTCATTGATGAAGCTTGATCTTCGTGGAAACTACTTTGTTAACCTACCTAGTGGCTTCATTTCTAATCTTTCCAAGCTTGAATATGTTTATTTGAATAATTGCCCCAAGCTTCAATCATTGCCACGGCTTCCATCAAACTTATCATCAACATATGCAAGTGACTGCTCTTCAATGAAACCATCATTAGGTTCACAACAACTGTGGGAGTTCTTCAAATCATTTGAATCTCAGGATGGCATGGTTTCGAGACGTACTCGAATGTTGAATATTCCAGGGAGTGAAATCCCACCATGGTTTCACAATCAAGATTTCTTTTGTTCGGACGACGTGATTGGTCTGTTTAAGCCAAACGTATCATTTATAACAGACATACCAGATTACTGTCATTCAAGTGAATGGTGGGGAATAGCCATATGCTTAGTGTTAGAAGGTGATTTGACTTCTGCACCATTTGAAAATTACCCTCCAATCATTCGTTGGAATTCCAGAGACCCTCAACTTAAATTCTCAAAAAAATGGATTTCCTTTAAAATTTATGAACAATACAATTGTCGTCATCAGCTCTTTTTCATGTTTGTTCCTTGTCAAGATGAGAAAAAGCTTCAAATGATTTTCTCCACTGACAAATTTGGAAACAAGGGGAAGGCAAAGTTTGAAATAAAGAAGTGTGGTTGGCGTGTGGTGTGTAAAGAAGATGTTGAAATGTGGCAGAAAACAAGGGGTGATAGCAGCAGCATTATTGATGATGAGAACGATTCAGACAACTATAAGAACAGTCTCAATGAAAAGAGACAATCATGCCATGATCGTTTCGTTGGTGAAAAAGATAAGCCTAGCTCTGATGTAGAACCGCAGCCTCCTCTTGCAAAGCGTAGAAAACTAGAATAA 3588 0.3815 MATRTNEGSSSSSSDSTRQWKYHTFLSFRGEDTRKSFTDHLYATLQRKGIIAFKDDQELERGQVIKQSLLQAIEESFSAVVILSPDYASSTWCLDELIEILRCRRELGLLVFPIFYGVDPSNIRHQRGSFAEAFEKHEEKFIHDKKKVQTWRDALQEVANLSGWDSENWRETKLIDHIIETLWSKLRYALPSDSDILVGVESKIAEMDSLVANRQDSVQFIGIWGMGGIGKTTLARVVYERIQGDFEVHCFLPNVRELSGKDGLISLQRKILSRMNIRNVEVDDCDEGRKLIKNILCNRKVLLILDDVSEISQLENLAGNHGWFGRGSRIIITTRDMHLLSLHGVSSQYEIKLLSNYESLQLFCKKAFKGDQPKEDYLELSRSVIEYAGGLPLALKVLGSFLCGKAILEWNDALAKLSRFLPNDILKILKVSFDGLDDDEKTIFLDIACFFKGMDTESVIQILQYCGLHAIIGIKVLIDKSLITNSNGNLEMHDLLQEMGKNIVSQESPNDASKRSRLWSLEDANKVLEKNNGTEAIQGIVLTLVKSYEAYWDPEAFSKMSSLRLLIISSHLHLPRCHLNLPHGLKCLSNTIKVLQWEGCPLDALPGQVSLDELVDLKMQLSKLKQLWRGTQLLRRLTSIDLSHSRYLIKTPNFDEIPNLQKIILEGCINLVEVHSSLGRHKNLVIVNLKDCKSMKALPSKLEMNSLETFILSGCSKVRKLPEFGKTMKHLYTFNLEETGIAKLPESLINLSGLAVLNLRNCKNLICLPNVIQYMKCIRVINFSGCSKFSRMPDISNENVALEELDASGTAIKEVPSSILHLINMKMLSFRGCTGQAQSSSSSWNLPSFIKWVFMLQRPSISTGLMLPPSLSSLSSLKELDLSHCNLCDESLPNDLNRLSSLMKLDLRGNYFVNLPSGFISNLSKLEYVYLNNCPKLQSLPRLPSNLSSTYASDCSSMKPSLGSQQLWEFFKSFESQDGMVSRRTRMLNIPGSEIPPWFHNQDFFCSDDVIGLFKPNVSFITDIPDYCHSSEWWGIAICLVLEGDLTSAPFENYPPIIRWNSRDPQLKFSKKWISFKIYEQYNCRHQLFFMFVPCQDEKKLQMIFSTDKFGNKGKAKFEIKKCGWRVVCKEDVEMWQKTRGDSSSIIDDENDSDNYKNSLNEKRQSCHDRFVGEKDKPSSDVEPQPPLAKRRKLE 1195
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dere10g0493 1195 PRINTS Disease resistance protein signature 220 235 - -
Dere10g0493 1195 PRINTS Disease resistance protein signature 295 309 - -
Dere10g0493 1195 PRINTS Disease resistance protein signature 872 888 - -
Dere10g0493 1195 PRINTS Disease resistance protein signature 388 402 - -
Dere10g0493 1195 SUPERFAMILY Toll/Interleukin receptor TIR domain 11 164 IPR035897 -
Dere10g0493 1195 Gene3D - 353 437 IPR042197 -
Dere10g0493 1195 PANTHER LEUCINE-RICH REPEAT-CONTAINING PROTEIN 22 769 IPR044974 GO:0006952
Dere10g0493 1195 FunFam Disease resistance protein (TIR-NBS-LRR class) 18 188 - -
Dere10g0493 1195 SUPERFAMILY L domain-like 492 947 - -
Dere10g0493 1195 Pfam NB-ARC domain 214 421 IPR002182 GO:0043531
Dere10g0493 1195 Pfam TIR domain 21 193 IPR000157 GO:0007165
Dere10g0493 1195 Pfam Leucine Rich Repeat 614 632 IPR011713 -
Dere10g0493 1195 MobiDBLite consensus disorder prediction 1140 1195 - -
Dere10g0493 1195 Gene3D - 15 186 IPR035897 -
Dere10g0493 1195 Gene3D - 187 349 IPR027417 -
Dere10g0493 1195 Gene3D Ribonuclease Inhibitor 726 966 IPR032675 -
Dere10g0493 1195 Gene3D Ribonuclease Inhibitor 553 725 IPR032675 -
Dere10g0493 1195 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 186 447 IPR027417 -
Dere10g0493 1195 ProSiteProfiles TIR domain profile. 20 190 IPR000157 GO:0007165
Dere10g0493 1195 SMART till_3 21 161 IPR000157 GO:0007165
Dere10g0493 1195 FunFam Disease resistance protein (TIR-NBS-LRR class) 355 437 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dere10g0493 Dere-ChrDere10 9392552 9397686 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dere10g0493 29 830 WRKY Transcription Factor Family AT4G12020 32.103 2.13e-108 373