Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dere10g0485 ATGGAGGAAGAAGCAAGAAAGAGAATGCTACGTAATTTTGAGGAAGCCATAGATTTCGTGAACGAGGTTCAGGTGAGATTTACAAATAGGATTGAAGATTTCAAGTCGTTTCTTCAAGTTGTGAGGATGTACCCAGGGGGTAGGAATGTAGTGCATACGTCAGTTTCCTCTCATTTGAAAGGCCATCCAGATTTACTTTCCGTTTTCGAACGCTTCCTTAACGATACGAAACCAGTACCGTTATCTCAAACGGCTCCCGTCAAATATCGAGACGCCGTTAGGGCTTTAGAACTCCGAGTTACAGGGTTCATCACGAAGTTGAGTAGAAGATTAGAGCCTGTTATTTACTTCCAATTCATGGAAGAACTTCATAAATGTCGGATTGAAGAGTCTGATTATGAAGAAACGAAGGCGATGGCTGAAGAATATATTGGGGAGCATTCGGATTTGATGGAGGAATTTGATGAAATCTGGAACAGAGGTGGCCGATTGAGTGACTCTGTTTGTAATCGAAAGCGTAAACCTGAACAATCGTCAACTCAAGATTGCACGCGCAAGAGATCAAAACCTGATGATGCTCCATTGCTCAGTGATGATGAACGTCCTGGAGAAGAACCAGTGATTGAAGAAACCAACCCTACCATTCAGAGTGAAAGCAATCCATTGCTCAATGATCATGAACGTCCTGGAGAAGAACCAATGATTGGAGAAATTGACCCTCCTATTCACAGTGAAAACAATTTATTGCTCAATGATCATGAAGGTCCTGGAGAAGAACCAGTGATTGAAGAAACCAACCCTACCATTCAGAGTGAAAGCAATCCATTGCTCAATGATCATGAACGTCCTGGAGAAGAACCAATGATTGGAGAAATTGACCCTCCTATTCACAGTGAAAACAATTTATTGCTCAATGATCATGAAGGTCCTGGAGAAGAACCAGTGATTGAAGAAACCAACCCTACCATTCAGAGTGAAAGCAATCCATTGCTTAATGATCATGAACGTCCTGGAGAAGAACCAATGATTGGAGAAATTAACCCTCCTATTCACAGTGAAAACAATTTATTGCTCAATGATGATGAACGTCCTGGAGAAAAACCAGTGATTGAAGAAATCAGCCCTCCCATTCACAGTGAAAGCAGATAG 1149 0.4169 MEEEARKRMLRNFEEAIDFVNEVQVRFTNRIEDFKSFLQVVRMYPGGRNVVHTSVSSHLKGHPDLLSVFERFLNDTKPVPLSQTAPVKYRDAVRALELRVTGFITKLSRRLEPVIYFQFMEELHKCRIEESDYEETKAMAEEYIGEHSDLMEEFDEIWNRGGRLSDSVCNRKRKPEQSSTQDCTRKRSKPDDAPLLSDDERPGEEPVIEETNPTIQSESNPLLNDHERPGEEPMIGEIDPPIHSENNLLLNDHEGPGEEPVIEETNPTIQSESNPLLNDHERPGEEPMIGEIDPPIHSENNLLLNDHEGPGEEPVIEETNPTIQSESNPLLNDHERPGEEPMIGEINPPIHSENNLLLNDDERPGEKPVIEEISPPIHSESR 382
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dere10g0485 382 MobiDBLite consensus disorder prediction 165 382 - -
Dere10g0485 382 Gene3D Paired amphipathic helix 10 77 IPR036600 GO:0006355
Dere10g0485 382 ProSiteProfiles PAH domain profile. 6 76 IPR003822 GO:0006355
Dere10g0485 382 PANTHER SIN3B-RELATED 12 196 IPR039774 GO:0003714
Dere10g0485 382 SUPERFAMILY PAH2 domain 12 75 IPR036600 GO:0006355
Dere10g0485 382 MobiDBLite consensus disorder prediction 165 202 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dere10g0485 Dere-ChrDere10 9218547 9219695 Tandem
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR Others Dere10g0485 None None None