Gene search


Sequence information


Select Gene Cds Cds_length GC_content Pep Pep_length
Dere10g0484 ATGGAGGAAGAAGCAAGAAAGAGAATGCTACGTAATTTTGAGGAAGCCATAGATTTCGTGAACGAGGTTCAGGTGAGATTTACAAATAGGATTGAAGATTTCAAGTCGTTTCTTCAAGTTGTGAGGATGTACCCAGGGGGTAGGAATGTAGTGCATACGTCAGTTTCCTCTCATTTGAAAGGCCATCCAGATTTACTTTCCGTTTTCGAACGCTTCCTTAACGATACGAAACCAGTACCGTTATCTCAAACGGCTCCCGTCAAATATCGAGACGCCGTTAGGGCTTTAGAACTCCGAGTTACAGGGTTCATCACGAAGTTGAGTAGAAGATTAGAGCCTGTTATTTACTTCCAATTCATGGAAGAACTTCATAAATGTCGGATTGAAGAGTCTGATTATGAAGAAACGAAGGCGATGGCTGAAGAATATATTGGGGAGCATTCGGATTTGATGGAGGAATTTGATGAAATCTGGAACAGAGGTGGCCGATTGAGTGACTCTGTTTGTAATCGAAAGCGTAAACCTGAACAATCGTCAACTCAAGATTGCACGCGCAAGAGATCAAAACCTGATGATGCTCCATTGCTCAGTGATGATGAACGTCCTGGAGAAGAACCAGTGATTGAAGAAACCAACCCTACCATTCAGAGTGAAAGCAATCCATTGCTCAATGATCATGAACGTCCTGGAGAAGAACCAATGATTGGAGAAATTAACCCTCCCATTCACAGTGAAAACAATTTATTGCTCAATGATGATGAACGTCCTGGAGAAGAACCAGTGATTGAAGAAACCAACCCTACCATTCAGAGTGAAAGCAATCCATTGCTCAATGATCATGAACGTCCTGGAGAAGAACCAATGATTGGAGAAATTGACCCTCCTATTCACAGTGAAAACAATTTATTGCTCAATGATCATGAAGGTCCTGGAGAAGAACCAGTGATTGAAGAAATCAGCCCTCCCATTTACAGTGAAAGCAGATAG 987 0.4205 MEEEARKRMLRNFEEAIDFVNEVQVRFTNRIEDFKSFLQVVRMYPGGRNVVHTSVSSHLKGHPDLLSVFERFLNDTKPVPLSQTAPVKYRDAVRALELRVTGFITKLSRRLEPVIYFQFMEELHKCRIEESDYEETKAMAEEYIGEHSDLMEEFDEIWNRGGRLSDSVCNRKRKPEQSSTQDCTRKRSKPDDAPLLSDDERPGEEPVIEETNPTIQSESNPLLNDHERPGEEPMIGEINPPIHSENNLLLNDDERPGEEPVIEETNPTIQSESNPLLNDHERPGEEPMIGEIDPPIHSENNLLLNDHEGPGEEPVIEEISPPIYSESR 328
       

Annotation information


Select Seq ID Length Analysis Description Start End IPR GO
Dere10g0484 328 Gene3D Paired amphipathic helix 10 77 IPR036600 GO:0006355
Dere10g0484 328 ProSiteProfiles PAH domain profile. 6 76 IPR003822 GO:0006355
Dere10g0484 328 MobiDBLite consensus disorder prediction 165 328 - -
Dere10g0484 328 PANTHER SIN3B-RELATED 12 196 IPR039774 GO:0003714
Dere10g0484 328 MobiDBLite consensus disorder prediction 165 202 - -
Dere10g0484 328 SUPERFAMILY PAH2 domain 12 75 IPR036600 GO:0006355
       

Duplication type information


Select Gene Chromosome Start End Duplicated_type
Dere10g0484 Dere-ChrDere10 9206591 9207577 Tandem
       

Transcription factors information


Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR Others Dere10g0484 None None None