Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dere10g0478 ATGGCCAGAGATACCGCAATGGAGCTTCCTCCTCGCGACGATTGCTGCCCTGTGTGCCACGGCGATTTCAACCTCCCATGCCGCACCTCCTGCTCCCACTGGTTCTGCGGGGAGTGCATATTACGAGTATGGCTGCATGGAGATGCAATGAAGCAATGCAGATGCCCAATGTGCTGTCGCCATTTTTCCAGTTTGGCTCCCTTCCAAGCAGCGTTTGACTGCAGCCAGGATCCAGAATCAAATAAAGTCATGGAAAATGTGAAAAGGTACAATAGGCTGCACATTGGAGGCATGCAAGGTCTCATTCAGAAACTTTTTGATCTCCCATTTTTTGTTCGGATGGCTCTACATGATATGATGGACCCTGATAAAACAAGTTCTATCTTGACTAGAGTGCGACTCTTTGCAATGCTACTTGGCATGATCTATGTGCTCAACCCATTCGAATTCCTTCCGTTTGCTAAACGAGACATATTAAATTTGTTTGACTTCTATGCGACTACACTTGTAACTATCATCCATCTTATCGCATTGTGTCGTGGAAGGCGTTTAATTAGGCGATAA 564 0.461 MARDTAMELPPRDDCCPVCHGDFNLPCRTSCSHWFCGECILRVWLHGDAMKQCRCPMCCRHFSSLAPFQAAFDCSQDPESNKVMENVKRYNRLHIGGMQGLIQKLFDLPFFVRMALHDMMDPDKTSSILTRVRLFAMLLGMIYVLNPFEFLPFAKRDILNLFDFYATTLVTIIHLIALCRGRRLIRR 187
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dere10g0478 187 ProSitePatterns Zinc finger RING-type signature. 31 40 IPR017907 -
Dere10g0478 187 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 2 95 IPR013083 -
Dere10g0478 187 ProSiteProfiles Zinc finger RING-type profile. 16 58 IPR001841 -
Dere10g0478 187 Coils Coil 185 187 - -
Dere10g0478 187 SUPERFAMILY RING/U-box 7 63 - -
Dere10g0478 187 PANTHER UNCHARACTERIZED 5 183 IPR038896 GO:0061630
Dere10g0478 187 SMART ring_2 16 58 IPR001841 -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dere10g0478 3 137 C3H Transcription Factor Family AT4G33940 42.963 3.88e-42 138