Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dere10g0475 ATGGAGAAGTACGAGCTGGTGAAGGATATAGGATCTGGGAATTTCGGGGTGGCCAGGCTTATGCGCAACAAAGAGACCAAGGAGCTCGTTGCCATGAAATACATTGAACGAGGCCACAAGATTGATGCGAATGTGGCAAGGGAAATCATAAACCATAGATCTCTTCGTCACCCGAATATAATTCGGTTCAAGGAGGTGGTATTGACTCCCACACATCTTGCGATAGTTATGGAGTATGCTGCTGGTGGAGAGCTCTTTGAACGAATATGCAATGCTGGAAGATTCAGTGAAGACGAGGCTAGATATTTCTTCCAGCAACTCATATCAGGAGTTAACTACTGTCATTCCATGCAAATCTGCCATCGGGACTTGAAGCTAGAGAACACCTTATTGGATGGAAGCCCTGCTCCACGTCTGAAAATTTGTGATTTTGGTTATTCAAAGTCATCTCTGCTTCATTCAAGGCCTAAATCAACAGTTGGAACTCCAGCCTACATTGCACCAGAGGTTCTTTCGCGTAGAGAATACGATGGAAAGTTGGCAGATGTATGGTCCTGTGGAGTGACTCTTTATGTCATGCTAGTGGGAGCATACCCATTTGAAGACCAAGAGGATCCCAAAAACTTCAGGAAAACCATACATCGAATTATGACTGTTCAATACAAGATCCCGGACTATGTTCACATATCTCAAGACTGCAGACACCTGCTATCTCGCATTTTTGTGGCAAATCCAGCAAGGAGAATCACCATCAAGGAGATCAAGTCCCACCCATGGTTTTTGAAGAACTTGCCTAGGGAATTGACAGAAGTTGCTCAAGCTGTCTACTACAGGAAAGGAAACCCAACCTTTTCCCTTCAGAGTGTAGAAGACATCATGAAAATTGTTGAGGAGGCCAAAACTCCACCCCAAGTTTCCAGGTCAGTCGGAGGATTTGGCTGGGGTGGAGAGGAAGAAGAAGAAGAAGAAGATGAAGCAAAAGAAGAACCAGATGCTGCTGTGGAGGAGGATGAAGAAGATGAATATGAAAAGAACGTCAAGGAGGCACAGGCTAGTGGAGAATTTAATGTCAGTTGA 1077 0.4466 MEKYELVKDIGSGNFGVARLMRNKETKELVAMKYIERGHKIDANVAREIINHRSLRHPNIIRFKEVVLTPTHLAIVMEYAAGGELFERICNAGRFSEDEARYFFQQLISGVNYCHSMQICHRDLKLENTLLDGSPAPRLKICDFGYSKSSLLHSRPKSTVGTPAYIAPEVLSRREYDGKLADVWSCGVTLYVMLVGAYPFEDQEDPKNFRKTIHRIMTVQYKIPDYVHISQDCRHLLSRIFVANPARRITIKEIKSHPWFLKNLPRELTEVAQAVYYRKGNPTFSLQSVEDIMKIVEEAKTPPQVSRSVGGFGWGGEEEEEEEDEAKEEPDAAVEEDEEDEYEKNVKEAQASGEFNVS 358
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dere10g0475 358 PANTHER SERINE/THREONINE KINASE 2 300 - -
Dere10g0475 358 ProSitePatterns Protein kinases ATP-binding region signature. 10 33 IPR017441 GO:0005524
Dere10g0475 358 ProSiteProfiles Protein kinase domain profile. 4 260 IPR000719 GO:0004672|GO:0005524|GO:0006468
Dere10g0475 358 FunFam Serine/threonine-protein kinase SRK2A 80 268 - -
Dere10g0475 358 SUPERFAMILY Protein kinase-like (PK-like) 2 292 IPR011009 -
Dere10g0475 358 Gene3D Transferase(Phosphotransferase) domain 1 80 268 - -
Dere10g0475 358 ProSitePatterns Serine/Threonine protein kinases active-site signature. 119 131 IPR008271 GO:0004672|GO:0006468
Dere10g0475 358 Coils Coil 332 352 - -
Dere10g0475 358 MobiDBLite consensus disorder prediction 304 358 - -
Dere10g0475 358 Pfam Protein kinase domain 4 260 IPR000719 GO:0004672|GO:0005524|GO:0006468
Dere10g0475 358 MobiDBLite consensus disorder prediction 315 343 - -
Dere10g0475 358 CDD STKc_SnRK2 3 259 - -
Dere10g0475 358 FunFam Serine/threonine-protein kinase SRK2E 1 79 - -
Dere10g0475 358 SMART serkin_6 4 260 IPR000719 GO:0004672|GO:0005524|GO:0006468
Dere10g0475 358 Gene3D Phosphorylase Kinase; domain 1 1 79 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dere10g0475 Dere-ChrDere10 9108607 9113446 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dere10g0475 3 263 CBL-interacting serine-threonine protein kinases AT4G24400 44.074 4.83e-69 220
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CAMK_OST1L Dere10g0475 Pkinase 7.9e-73 CL0016