Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dere10g0466 ATGGTTAAGGGGGCCTTCTCCTTTAGCCGCTCCGGCAGACGCAGCCGCCACAGAAAGGTGGCTGGGCTGCCGCAGCAGGCAATTGGAGGGGCCGATTTTCCGGGGAACAACAACACTGCCGATGGCTTCATAACCAAGGCCAAGAAGAAGACCGGAGGAGGGAAGCTGTGGATGAGGTTCGATAGGGTGGGTCGTTCAGAGCTCGTAGAGCTGGATAGGAGCGCGGTTATTAGGCGGGCAGCAATTCCGGCCAGGGATTTGAGGATTCTGGGCCCTATCTTCTCCCAGTCTTCCCATATCCTCGCCAGAGAGAAAGCAATGGTAGTTAATTTAGAGTTTATAAAGGCTGTAGTCACAGCCGAAGAAGTGCTATTGCTTGATCCTCTTCGCCAGGAGGTTCTTCCATTTGTTGAACAACTCAGGCAACAACTTCCAAATAAAAGTCGACCTAAAGTTCATGTCCCTACAGATGAACAAGAAAATGAAATGCAGTTTTCGACTGGCAGACAATGGTTAACAGTGCCAGAGCTTGCTGAAGGTTTGCAGCCTGAGCTCCCATTTGAGTTTCAAGTTCTGGAGATTGCTTTAGAAGTTGTCTGTACATGTTTGGACTCAAGTGTAGCGGATCTTGAGAGGGTTGCTTACCCTGTGTTGGATGAATTGGCTCGGAGTGTTAGCACCAAGAATCTTCAAAATGTTCGAAATTTGAAGAGTAATGTTACGCGTTTGCTGGCACGTGTGCAAAAGGTGCGGGATGAAATCGAACATTTATTAGATGATAATGAAGATATGGCACAATTGTATTTGACAAGGAAATTGATACAGAGTCAGCAATCTGAGGCTCATTTGGGAGTCATGACCTTAAATAGCCTCACTACTACAGCCCTAGCTCGTCAATTTTCTAGCAGAAGCGGAAGTCTTGTGACTTACAAATTCGGGGATGATGATGATGTGGAGGACGTGGAGATGTTGCTTGAGGCTTATTTTATGCAGTTGGATGGAACTCGGAACAAGATATTGTCTGTTAGGGAGTACATTGCTGATACAGAAGACTACGTTAACATCCAACTGGACAATCAGCGAAATGAACTCATTGAGCTTCAGTTGACTTTGATCATTGCATCATTTGTTATTGGAATTAATACTTTTATTTCCGGTGCATTTGGTATGAACATTCCTTGTCAATTATATCAAACAGATGGACTATTTTGGAGCTTTGTTTGTTCCATTTCTGCAGCTTGCATTTTGCTTTTCCTGCTTATGTTGGGTTATGCCAGGTCGAGAAAATTGCTTAGTTTGTAA 1302 0.4478 MVKGAFSFSRSGRRSRHRKVAGLPQQAIGGADFPGNNNTADGFITKAKKKTGGGKLWMRFDRVGRSELVELDRSAVIRRAAIPARDLRILGPIFSQSSHILAREKAMVVNLEFIKAVVTAEEVLLLDPLRQEVLPFVEQLRQQLPNKSRPKVHVPTDEQENEMQFSTGRQWLTVPELAEGLQPELPFEFQVLEIALEVVCTCLDSSVADLERVAYPVLDELARSVSTKNLQNVRNLKSNVTRLLARVQKVRDEIEHLLDDNEDMAQLYLTRKLIQSQQSEAHLGVMTLNSLTTTALARQFSSRSGSLVTYKFGDDDDVEDVEMLLEAYFMQLDGTRNKILSVREYIADTEDYVNIQLDNQRNELIELQLTLIIASFVIGINTFISGAFGMNIPCQLYQTDGLFWSFVCSISAACILLFLLMLGYARSRKLLSL 433
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dere10g0466 433 CDD Mrs2_Mfm1p-like 57 430 IPR039204 -
Dere10g0466 433 MobiDBLite consensus disorder prediction 1 21 - -
Dere10g0466 433 FunFam magnesium transporter MRS2-4 132 364 - -
Dere10g0466 433 FunFam Magnesium transporter MRS2-1 45 128 - -
Dere10g0466 433 Gene3D - 44 128 - -
Dere10g0466 433 Gene3D Magnesium transport protein CorA, transmembrane region 129 364 - -
Dere10g0466 433 Coils Coil 233 267 - -
Dere10g0466 433 PANTHER RNA SPLICING PROTEIN MRS2, MITOCHONDRIAL 38 431 IPR039204 -
Dere10g0466 433 Pfam CorA-like Mg2+ transporter protein 232 422 IPR002523 GO:0016020|GO:0030001|GO:0046873|GO:0055085
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dere10g0466 Dere-ChrDere10 8978061 8981579 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dere10g0466 39 431 MRS2 Gene Family AT3G58970 66.332 0.0 513