Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dere10g0462 ATGGGTAAAGTTCTGATTTTGATATTCTTCTCCGTCATCGTCTTCTCCATTTCACTTTCACCCTCTTATGGGTTCGATCCATTGGATCCTTACGGCAACATCACAATCACATGGGATTTCTTGACTGATAATGGGGAGACATTCGATCCTCCGGTTGGGTTTTGTTCAGCTGAACACAGTCCTACCAGTTTCTCTGTGTACCTGATCCAATGTCCAATGGATGAACTCCACGTCATCCTATCTATAGTACTTCATTCTATGGACCTGGGTAGTGTCAAGTTGGTGAAGGTATCAATACACAACTTCCAACTATACCGACATGTGGAGAAGCCGGGTTGGCGAGTGAGGTGGTCATGGAAAGGTGATGAGGTGATATGGAAAATGTGGGGGGCAGAGGCCACAGAGCAAGGGAACTGCTCAAGGTTCAAGGGACAAGAGATGCCACATTGTTGTGAGAAGGAGCCTACTATCATTGATCTTGAGCCTGGGACTCCATATAACATGCAAGTTCCTAATTGCTGCAAAGGAGGGGTCCTAGCATCTATGACTCAAGATCCCACAAAAACTGCTTCCACCTTTCAATTGAACTTCAATAAAGCCTCAATTCCAATCCCTAACAACATTAGCATGCCTGAGAATTTCACCCTTGGAATCCCTGGCTACTCTTGTAGCCAACCTGTTCAGGTCCCTCCTAGTAAGATCACCACTGATGGCCGTAGATGGACACAAGTTCTTGATACATGGAATGTGACCTGTAGTTACTCCCAGTTCTTAGCATCACCTGCTCCAAAATGTTGTGTCTCTTTGTCAGCTTTCTATAACAGTACAATTGTTCCATGCCCTAAATGCAGCTGCAATTGCCAAGGCCTTCCTGGAGCACATTGTGTCAACTCTGGTGAAGCTCCTTCCTTGCTGCAACTGCCACAAGATTTGAACACAGAAGAGCCACCTCCATTAGTGAGGTGTACACAGCACATGTGCCCTATTAGAATTCACTGGCATGTGAAACAGAGCTATACAGAGTATTGGAGAGTCAAGATTACAATCACAAATTACAACTTTGTCAAGAACTATTCTCAGTGGAATCTAGTGCTCTTACACCCTAATTTGCAGAGTGTAACCCAAGTTTTCAGCTTCAACTACCATCCATTGAGAATTTATGGAGATACCAATGACACAGGGATGTTCTGGGGAATAAAGTACTACAACGACATGTTGCTGACATGTGGGGATAGTGGGAATGTACAGACAGAGATGTTACTGCACAAAGATCCTGGAAACTTCACCTTCAAAGATGGGTGGGCTTTTCCAAGGAGGATTTCCTTCAATGGAGATGAATGTGTTATGCCCTCCCCAGAGGTTTACCCTAGGCTTCCCAATACAGCTCATACTGTCACAAAAACTTCTTTTTTGCTTTTCTTCTTATTTTTGCTCTCAATATTGTTATACTAA 1452 0.4387 MGKVLILIFFSVIVFSISLSPSYGFDPLDPYGNITITWDFLTDNGETFDPPVGFCSAEHSPTSFSVYLIQCPMDELHVILSIVLHSMDLGSVKLVKVSIHNFQLYRHVEKPGWRVRWSWKGDEVIWKMWGAEATEQGNCSRFKGQEMPHCCEKEPTIIDLEPGTPYNMQVPNCCKGGVLASMTQDPTKTASTFQLNFNKASIPIPNNISMPENFTLGIPGYSCSQPVQVPPSKITTDGRRWTQVLDTWNVTCSYSQFLASPAPKCCVSLSAFYNSTIVPCPKCSCNCQGLPGAHCVNSGEAPSLLQLPQDLNTEEPPPLVRCTQHMCPIRIHWHVKQSYTEYWRVKITITNYNFVKNYSQWNLVLLHPNLQSVTQVFSFNYHPLRIYGDTNDTGMFWGIKYYNDMLLTCGDSGNVQTEMLLHKDPGNFTFKDGWAFPRRISFNGDECVMPSPEVYPRLPNTAHTVTKTSFLLFFLFLLSILLY 483
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dere10g0462 483 Pfam COBRA-like protein 95 255 IPR006918 GO:0010215|GO:0016020
Dere10g0462 483 PIRSF COBRA 1 58 IPR006918 GO:0010215|GO:0016020
Dere10g0462 483 PIRSF COBRA 70 483 IPR006918 GO:0010215|GO:0016020
Dere10g0462 483 PANTHER PROTEIN COBRA 12 474 IPR006918 GO:0010215|GO:0016020
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dere10g0462 Dere-ChrDere10 8953623 8958877 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dere10g0462 1 459 COBRA Gene Family AT1G09790 52.165 2.30e-160 460