Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dere10g0421 ATGGAAGCAAAATTCTTGTTGGTGATTGTGCACTTTTCAAACCACCTAGAGATTCTCGTCCTTTTCATTGGAATAATTTGCAAGTTAATGCTGAATAAGGAGGAAAGCCCAAGCTTAGAAGTGAATTGGCTTTACAGATCTGTTGATTTGAAGCTTATGAAGGGTATCTTACTGGAAGCTGCACCAAACGAGGTCTTCAACTCATTCCACAAGGATGAAACACCTGTCGCATCATTACTCCATCTGTGTAAGGTTGCATTCCTTCGAAGAGGTGTTGAACTTCCATCAGGGAGATCTGCATTTGTCTGTAGGCATATCTATGACATTGAGAACAAGTGTTTATGGTGGTTAACTGATAAAGACTACCTTAAGGAATGTCAAGAAAAAGGGAAAATTGGTGATATTAGCATGCCTAAAGAAAGTGATAAGTCTGTTGAAGAATTCTTGTTAGCTTTACTTCATGCATTGGATAAGCTCCCCATGAATCTTCATGTATTGCAAACCTGTAATGTTGGAAAGTCTATCAATAATTTGCATAGTCACAAAAATTTTGAAATTCAAAAGAAAGCAAGGAGTTTAATTGATACATGGAAGAAATGTGCTGAGGTTGAAATGAATAAAAATGATGAAAAATCTGGTTTAACCCGGGCCCTTTCTTGGTCAGCAAAGCCAACACCTTCTGAGGTTTCTCAAACTGAAAATAGGAAAATAGGAGGATCTATTGAGGTCACTGCAAAGTGCTCTGCAACGCAAAGCATGGCATCTAAAAGTTCCCAAGATATGCCTAGCACTGGAGAAGCATTGTCCAAATCCTCTCAATATCCTAGTTTAGCAAAATCAATTAATGCTTCAGTGGGTTGCAATTCAAAGAGGCAGAATGATAAGATGTTTGCTCGATTCTCCTCGTTAAGAGCAGAGCTGAGATCTGCCATGTTGAAGTTATCCTTGTCACTACTCATTAAGCCCAAGTTGTAG 975 0.3867 MEAKFLLVIVHFSNHLEILVLFIGIICKLMLNKEESPSLEVNWLYRSVDLKLMKGILLEAAPNEVFNSFHKDETPVASLLHLCKVAFLRRGVELPSGRSAFVCRHIYDIENKCLWWLTDKDYLKECQEKGKIGDISMPKESDKSVEEFLLALLHALDKLPMNLHVLQTCNVGKSINNLHSHKNFEIQKKARSLIDTWKKCAEVEMNKNDEKSGLTRALSWSAKPTPSEVSQTENRKIGGSIEVTAKCSATQSMASKSSQDMPSTGEALSKSSQYPSLAKSINASVGCNSKRQNDKMFARFSSLRAELRSAMLKLSLSLLIKPKL 324
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dere10g0421 324 PANTHER BAH AND TFIIS DOMAIN-CONTAINING PROTEIN-RELATED 129 298 - -
Dere10g0421 324 CDD TFIIS_I 127 199 - -
Dere10g0421 324 MobiDBLite consensus disorder prediction 251 272 - -
Dere10g0421 324 Gene3D - 10 126 IPR043151 -
Dere10g0421 324 ProSiteProfiles TFIIS N-terminal domain profile. 127 204 IPR017923 -
Dere10g0421 324 SUPERFAMILY Conserved domain common to transcription factors TFIIS, elongin A, CRSP70 142 212 IPR035441 -
Dere10g0421 324 SMART BAH_4 6 118 IPR001025 GO:0003682
Dere10g0421 324 ProSiteProfiles BAH domain profile. 2 118 IPR001025 GO:0003682
Dere10g0421 324 SMART TFS2_5 124 203 IPR003617 GO:0005634
Dere10g0421 324 Gene3D Conserved domain common to transcription factors TFIIS, elongin A, CRSP70 127 214 IPR035441 -
Dere10g0421 324 MobiDBLite consensus disorder prediction 215 235 - -
Dere10g0421 324 Pfam TFIIS helical bundle-like domain 152 199 IPR017923 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dere10g0421 Dere-ChrDere10 7402038 7405038 Dispersed/Transposed
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR IWS1 Dere10g0421 Med26 2.6e-12 No_clan