Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dere10g0420 ATGGAACTGTCAGATTTGCAAAACAATTCCAACAAGCAGATTAGAAGCACTAACAACACACCCACTCATCACCACCTTCATCATCTCCAACAGCAGCAGAAGCAGCTACCTTCGACGACAACGTCCTCGCAGGTTGTGGTCCCTAAATTCGATGGCAGGCCATCACCTTCTTCATCTTCTTCATTCATGGGCTCCATCTCCATCCAAGCTGGCCTATCTTCTTCTTCGTCTTCGTCTTTGTCTCTGTCTTCGTCGTCTTCTTCTGCTGCTGCTGCTGTTGCTGCTGCTTCCTTGTCTAACAATTCTTCTTCGTCATCTTCCCTACCTGCTTCTACTTCCTCCGATGCTCCTCACCTCATTGATGCCTCCCTAGCCATCGCTACTAGATCTGAGACCCACCCATCTACAAGACCCGGAGCTGTGGTCGATTCCGCCAAGAAAACGCAAATTCAGCAACAATTGTCGATTTCCACGGCTGCGACGGCCACTGCGAACTTGCCTAAGCGGTTCACGAAGGATAGGCACACCAAGGTGGATGGACGGGGCCGGAGAATTCGAATGCCGGCCGCGTGTGCCGCTAGGGTTTTTCAATTGACCAGGGAATTGGGACACAAGTCGGACGGGGAGACAATCGAGTGGCTGCTGCAGCAGGCGGAGCCGGCGATCATCGCAGCAACCGCCACCGGCACGATTCCGGCGAACTTCTCGACTCTTAACGTGTCGCTCCGGAGCAGCGGGTCGACTATCTCGGCTCCGCCGTCGAAGTCCGCTCCGCATACGTTTCACGGCGCCTTGGCTCTCGCTGCTCATGGTCACCAACATCATCATCCTTACGAAGAAGCTTTCCAGCACACTGCTCTGTTAGGGTTTCACCCTCACCACCACCACCACCAACAGCAACATAATCAGCCTCATCTACTGACCGCCAACCAGATTGCAGAAGCGATTCCAGCCGGCGGAGGAGGCGGCGGGGAGAGTGGAGGTGACACACCTGAGAACTATGTGAGAAAACGCTTCAGAGAAGATCAGTTCAAAGAAAATAACCAGCCACAAAACGAGAGTGGAGGAAGCTCGCCTAAGGCATTCAAGGCCAATTTACAACAAATCCCGAAGCAACCGGAAGCATCTGGATCTTCGGGTCTTCTTCGTCCCCCGAACATACTCCCTGCCGCCGCCGCTATGTGGGCGGTGGCACCAGCTCCGACGAGTGGCGCCGGCAGCACAATCTGGATGCTACCTGTGAACGCCAGCGGGTCCGGGTCAGGTCCGGCTCCGGAGACTCAAATGTGGCAGTTTCCGACCGCGCAAGCTGGTTCTGGGAATAATACCTTACAAGCGCCTCTGCATTTCATGCCTAGGTTCAATCTTCCCGGAAGCCTTGAATTTCAAGGAGGTGGTGGGAGAGGGGGTTCTCTGCAACTGGGTTCCATGATAATGCCTCATCAACATCAGCAACCATCTCAGCATCTTGGGTTGGGGATGCCTGAGTCTAATCTGGGGATGTTGGCTGCCCTAAATGCCTATTCTAGAGCTGGTTTGAATATGAACTCTGAGCAAAATCACGTCATCATCAACAACAACAGCATCAGCAACAAGCAACTGATAGTGGAGAAGAAGGTTCTGATATTTCCCAATGACTTGCAGGGACAGAAGAACATTGGATTATTGGAAGTTGAATTTGTGATAATAAGTGAGTGA 1698 0.5271 MELSDLQNNSNKQIRSTNNTPTHHHLHHLQQQQKQLPSTTTSSQVVVPKFDGRPSPSSSSSFMGSISIQAGLSSSSSSSLSLSSSSSSAAAAVAAASLSNNSSSSSSLPASTSSDAPHLIDASLAIATRSETHPSTRPGAVVDSAKKTQIQQQLSISTAATATANLPKRFTKDRHTKVDGRGRRIRMPAACAARVFQLTRELGHKSDGETIEWLLQQAEPAIIAATATGTIPANFSTLNVSLRSSGSTISAPPSKSAPHTFHGALALAAHGHQHHHPYEEAFQHTALLGFHPHHHHHQQQHNQPHLLTANQIAEAIPAGGGGGGESGGDTPENYVRKRFREDQFKENNQPQNESGGSSPKAFKANLQQIPKQPEASGSSGLLRPPNILPAAAAMWAVAPAPTSGAGSTIWMLPVNASGSGSGPAPETQMWQFPTAQAGSGNNTLQAPLHFMPRFNLPGSLEFQGGGGRGGSLQLGSMIMPHQHQQPSQHLGLGMPESNLGMLAALNAYSRAGLNMNSEQNHVIINNNSISNKQLIVEKKVLIFPNDLQGQKNIGLLEVEFVIISE 565
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dere10g0420 565 PANTHER TRANSCRIPTION FACTOR TCP4-RELATED 94 508 IPR005333 GO:0003700
Dere10g0420 565 MobiDBLite consensus disorder prediction 341 361 - -
Dere10g0420 565 Pfam TCP family transcription factor 171 297 IPR017887 -
Dere10g0420 565 ProSiteProfiles TCP domain profile. 171 225 IPR017887 -
Dere10g0420 565 MobiDBLite consensus disorder prediction 1 64 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dere10g0420 Dere-ChrDere10 7397486 7399306 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dere10g0420 168 498 TCP Transcription Factor Family AT1G35560 45.697 3.77e-64 211
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF TCP Dere10g0420 TCP 1e-37 No_clan