Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dere10g0415 ATGGCATCCACCAAGGAACGTGAAAGCTTCGTCTACGTCACCAAGCTTACTGAGCAAGCTGAGCGCTACAAAGAAATGGTGGATGCGACGAAGAAGGTTGCTAAGCTCAAGGTTGAATTAACAGTTGAAGAGCGAAACCTTCTCTCTGTTAGGTACAAGAAGGTAGTGGGTGCAAGGAGAGCTTCGTGGAGAATTCTGTCCTCAATTGAGCAGAAGGAGGTAGCAAAAGGGAATGATTTGAATGTGAAGCGTATAAAGGAGTATAGGCAGAAAGTGGAATCGGAGCTGTCAAATATTTGCAACGATATCATTGACTATCATCGGTATCTGGCAGAATCTAAGTCTGGTGACGAGAGGAAAGAGGCTGTTGATCAGTTGATGAAAGCATATCAGACAGCTTCAACTAATGTAGAGGCTGAGTTACCTCCCACACATCCCATCAGATTAGGTTTGGCTTTGAATTTCTCCGTCTTTTATTATGAAATTTTGAACTCTCCTGAAAGAGCCTGTCACCTTGCCAAGCAAGCCTTTAATGAAGCAATCTCAAAGTTGGATACTCTGAGTGAGGAGTCTTACAAAGATAGCACACTAATTATGCAGCTTCTTAGGGACAACCTCACCTTGTGGACTTCTGACATCCCTGAAGATAGGGTAATCACAAAATAG 666 0.4324 MASTKERESFVYVTKLTEQAERYKEMVDATKKVAKLKVELTVEERNLLSVRYKKVVGARRASWRILSSIEQKEVAKGNDLNVKRIKEYRQKVESELSNICNDIIDYHRYLAESKSGDERKEAVDQLMKAYQTASTNVEAELPPTHPIRLGLALNFSVFYYEILNSPERACHLAKQAFNEAISKLDTLSEESYKDSTLIMQLLRDNLTLWTSDIPEDRVITK 221
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dere10g0415 221 PRINTS 14-3-3 protein zeta signature 88 112 IPR000308 -
Dere10g0415 221 PRINTS 14-3-3 protein zeta signature 39 68 IPR000308 -
Dere10g0415 221 Gene3D - 105 219 IPR036815 -
Dere10g0415 221 Gene3D - 1 104 IPR036815 -
Dere10g0415 221 ProSitePatterns 14-3-3 proteins signature 2. 192 211 IPR023409 -
Dere10g0415 221 SMART 1433_4 7 221 IPR023410 -
Dere10g0415 221 SUPERFAMILY 14-3-3 protein 6 212 IPR036815 -
Dere10g0415 221 PIRSF 14-3-3 1 105 IPR000308 -
Dere10g0415 221 PIRSF 14-3-3 104 220 IPR000308 -
Dere10g0415 221 Coils Coil 13 46 - -
Dere10g0415 221 Pfam 14-3-3 protein 105 210 IPR023410 -
Dere10g0415 221 PANTHER 14-3-3 PROTEIN 105 213 IPR000308 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dere10g0415 Dere-ChrDere10 7235007 7235746 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dere10g0415 1 216 14-3-3 family AT2G42590 70.539 2.82e-122 346