Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dere10g0406 ATGTCTCTTCTATTACGAAGACCACCGGGTCGCGAAGCTTATCCAGGAGATGTTTTTTATTTACATTCACGCCTTTTGGATAGAGCCGCTAAATCAAGTTCTCAGTTAGGTGAAGGAAGTATGACTACTTTACCAATAGTTGAGACCCAATCGGGAGATGTTTCAGCTTATATTCCTACTAATGTAATTTCCATTACAGATGGCCAAATATTTTTATCCGCCGATCTATTCAATGCTGGAATCAAACCTGCGATTAATGTGGGAATTTCCGTCTCTAGAGTTGGATCTGCGGCTCAAATTAAAGCCATGAAGCAGGTAGCTGGTAAATTAAAATTAGAATTGGCACAATTCACAAAATTAGAAGGTTTTGCACAATTCGCTTCTGATCTCGATAAAGCTACTCAAAATCAATTGGCAATAGGTCAATGA 429 0.3869 MSLLLRRPPGREAYPGDVFYLHSRLLDRAAKSSSQLGEGSMTTLPIVETQSGDVSAYIPTNVISITDGQIFLSADLFNAGIKPAINVGISVSRVGSAAQIKAMKQVAGKLKLELAQFTKLEGFAQFASDLDKATQNQLAIGQ 142
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dere10g0406 142 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 1 98 IPR027417 -
Dere10g0406 142 ProSitePatterns ATP synthase alpha and beta subunits signature. 83 92 IPR020003 GO:0005524
Dere10g0406 142 PANTHER ATP SYNTHASE SUBUNIT ALPHA, MITOCHONDRIAL 1 142 IPR005294 GO:0015986|GO:0045261|GO:0046933
Dere10g0406 142 Gene3D - 1 99 IPR027417 -
Dere10g0406 142 Pfam ATP synthase alpha/beta chain, C terminal domain 99 142 IPR000793 GO:0015986
Dere10g0406 142 SUPERFAMILY C-terminal domain of alpha and beta subunits of F1 ATP synthase 100 142 - -
Dere10g0406 142 Gene3D - 100 142 IPR038376 -
Dere10g0406 142 Pfam ATP synthase alpha/beta family, nucleotide-binding domain 1 92 IPR000194 GO:0005524
Dere10g0406 142 FunFam ATP synthase subunit alpha, mitochondrial 1 99 - -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dere10g0406 9 98 Primary Pumps ATPases(2) AT4G38510 34.444 2.55e-10 55.5