Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dere10g0397 ATGACCAAGAGAACCAAGAAGGCCGACATTGTTGGGAAATATGGTACCCGATATGGTGCTAGTCTTAGAAAGCAAATTAAGAAGATGGAAGTGAGTCAGCACAGCCAATACTTCTGTGAGTTCTGTGGAAAGTATGCTGTTAAGAGGAAGGCTGTGGGTATATGGAGCTGCAAAGATTGTGGAAAAGTGGAAGCTGGAGGTGCTTACACATTGAATACAATAAGTGCGGTGACAGTCCATAGCATCATAAGGAGGTTGAGAGAGCAGACTGAGGGCTGA 279 0.448 MTKRTKKADIVGKYGTRYGASLRKQIKKMEVSQHSQYFCEFCGKYAVKRKAVGIWSCKDCGKVEAGGAYTLNTISAVTVHSIIRRLREQTEG 92
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dere10g0397 92 FunFam 60S ribosomal protein L37a 2 92 - -
Dere10g0397 92 Hamap 50S ribosomal protein L37Ae [rpl37ae]. 4 72 IPR002674 GO:0003735|GO:0005840|GO:0006412
Dere10g0397 92 PANTHER ZGC:171772 1 91 - -
Dere10g0397 92 Pfam Ribosomal L37ae protein family 4 88 IPR002674 GO:0003735|GO:0005840|GO:0006412
Dere10g0397 92 SUPERFAMILY Zn-binding ribosomal proteins 10 80 IPR011332 GO:0006412
Dere10g0397 92 Gene3D - 1 92 IPR011331 GO:0003735|GO:0005840|GO:0006412
Dere10g0397 92 NCBIfam ribosomal protein eL43 1 91 IPR002674 GO:0003735|GO:0005840|GO:0006412
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dere10g0397 Dere-ChrDere10 6906879 6907157 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dere10g0397 1 91 Cytoplasmic Ribosomal Protein Gene Family AT3G10950 87.912 6.78e-56 166