Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dere10g0370 ATGGCCGTAGAGAGTGGCAGTGTTGGTGTGGGGGATGACACGGGAGCATCGCCGAGGAAAAAAATTAAGTTCTTATGCAGCCATGGCGGTAAGATTCTTCCAAGACCCGGCGACGGCGTCCTGAAGTACGTCGGCGGCGAGACACGTGTCATTTCCGTGCCTCGTGACATCACTTTCTCAGAACTTATGAAGAAAGTCACTGCTTTAACTGACGGTGACATGATCTTAAAGTACCAGCTGGTCCCTGAAGATCTAGATGCCTTGGTCTCAGTTAGATCAGATGCAGATCTCCCACACATGTTTGATGAGCATGATCGTCATGTAGGTGGAGCTCCAATGCTTCGGGCATTCTTGTTTCCCTCCAAACCAGTTGTATTAGAGAGCCACGCAGCTGTTTCTGATCCTCGTATGTTGGAGCAGCGTTATATTGATGCCATCAATGGCATCGTCCAGTCAGGCCCCGGGGCAAGGCTCTGCCCTATCAGAGCAGTGTCCTCTGCTTGTTCTTCCCCAAAATCCAACTCCCCAGATGGTCATTCTTTTGATGTAATACATGAATCATTCTTTCGCAATAATCAGGCGTCAATGCATAGAGTGCGAAGTTCTCCCAGCTTCAGCAGCCTAAGCAACCTCCAAAGCAGCCTCAATAGTCCACAGTATGATCACAGTTATCATCACCACCAGAACCACTACCAGCACCACCCTCATGGCCACCCTTCTGTTAGACCGTCACCAGATCCATATATCGGAGTTGGGTTTGGAAGGCCACCCCCTATGTCGTCATTGCCCAGGCAAGATAGTGGTAGGGCTAATGGTTTAAGCCAGTATTACCCAATGAGCAGACAAAACAGTCATAAAGGGAGTGCAGGCTGCTCCAAGTGTGGAGAACATGATGAATTTTCACCTTCTGTACATGTGAGGTTCGAGAGAAACAATAGTGCTTCTCGCCCTCCCAGTCCTAGACAGAGTATATGGGAATATTAA 984 0.4888 MAVESGSVGVGDDTGASPRKKIKFLCSHGGKILPRPGDGVLKYVGGETRVISVPRDITFSELMKKVTALTDGDMILKYQLVPEDLDALVSVRSDADLPHMFDEHDRHVGGAPMLRAFLFPSKPVVLESHAAVSDPRMLEQRYIDAINGIVQSGPGARLCPIRAVSSACSSPKSNSPDGHSFDVIHESFFRNNQASMHRVRSSPSFSSLSNLQSSLNSPQYDHSYHHHQNHYQHHPHGHPSVRPSPDPYIGVGFGRPPPMSSLPRQDSGRANGLSQYYPMSRQNSHKGSAGCSKCGEHDEFSPSVHVRFERNNSASRPPSPRQSIWEY 327
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dere10g0370 327 MobiDBLite consensus disorder prediction 264 289 - -
Dere10g0370 327 CDD PB1_UP2 25 119 - -
Dere10g0370 327 Gene3D - 42 120 - -
Dere10g0370 327 SMART PB1_new 36 121 IPR000270 GO:0005515
Dere10g0370 327 MobiDBLite consensus disorder prediction 200 327 - -
Dere10g0370 327 PANTHER OS05G0427100 PROTEIN-RELATED 16 284 - -
Dere10g0370 327 MobiDBLite consensus disorder prediction 200 222 - -
Dere10g0370 327 SUPERFAMILY CAD & PB1 domains 38 125 - -
Dere10g0370 327 MobiDBLite consensus disorder prediction 306 327 - -
Dere10g0370 327 Pfam PB1 domain 41 120 IPR000270 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dere10g0370 Dere-ChrDere10 6476053 6477878 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dere10g0370 21 181 MAP Kinase Kinase Kinase AT5G57610 44.578 4.27e-32 124