Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dere10g0347 ATGGATGGTCAAGATCGGCATATGAATATACGTAATGGCAAGGCACAAGTTTTTCCCAAAATGGAGTCCCTTGATTTTCCCAATAGAGAAGCAGTAGAGGCATTTGGCAAAACAGAGCCATTTGATCACTTCCCCAAAATAGAAAAGCTGGAGCCATTTGGAAAAACAGAGCCTTTGGATCTGCCCAAAACAGAAAAACTGAAGCCCCTCGTGAAAACGAAGAGACTTGGTTTTCCTAGATTAGTTCCATTTAGGAAACCAAAACCACAAAATTTTCCCAAAACCAAAACAATGAAGCAGTTTGGTCAACCACGGTTTGGATCGAATTCCGAAGAAGAGAGAAAGCATTTGCTGTTGTATTTGAGCAGGATAAGAGATTTTATCATGCTCATGTTGAATTACCCTGTCAGAACAGATGATTATGTACTCAACATTCATCATGTTATGTTATCTACTAGAGATGGTGCAGAAAAAAGACTAGTTGCAGAAAGAATAAAAGCAGCCTTGAAAGATGAGGACAATATGATTCGCCTTCGTGAATCCTTTGAAGGAGTCTTGTGTATTGATGCCTCAGTTTATCAACGCCAGGTGGAGACTCATGTTCGACAACAGATCGCTCAACAACTTCAGCTTCCATTAATTATTAAAGAGGATGAGGAAGAAGGCAATGGCAGTTGGCTTATAACATTGCGTATAGCAGAGCAGTGTGGTAGCCATCTTCTTGCCCTTGCCATTGTGGCAATATCCCTAAAGAATGCAAAAAATGGGGAACTTTGGAACCATGCTCAGGGCAAGTTGCGTTGGATTCGTTCTTCCTATGACCTTAGTTTGTTTCATGGTCAAAGCAGAGTCATGGTTAATTCGTTCATAAATTTCATCTGGCATGATATAAGTATGACACAGAAACAATGTCTTACATATTGCTTGTTCTTTCCTAATATCAAAGATGGGAAGCTTAAAAAAGAGGTGATCAGTGATTGGTTTTCTTCTCAATTAGTGGTCGCTGGACAAGCACAACAAAACTTGAAAGAGCTTGTTGACCGTTTTGCCTTATTGCAATTTAAAGACACCAAGTCCAGGTATATCCAAATGCCAGAAGACATCTATGCCATTTTGCAATCATTAAACGCACAGAATCCTTTGTTCATTAAAAAAGCTGGGTTCGGGTTGATTAAGCCACCAGATAGTGAGCTATGGCATAGTGTTGTACATATTGAACTAGCGTACAACAAACTATCTGAGCTACCGTTGTCTCCAAACTGTTTGCAGCTTAAAGTGTTGATGTTGCATAACAACGCTGACTTGACAAAAATACCACCCGATTTTTTCTTCAAAATGCCTCTACTTTGCATCCTGGACTTATCTTACACCAGTATAACAGAACTACCGAGTTCTTTTTTTGAGTTGGAGCAACTTAGAGAACTTTATATGAAAGGTTGCGAAGGCTTTATGAAATTAGCCCCCCAGGTTGGTAAATTGAAGAAACTTGAAAAGCTTGATCTTGACAAGACTCAGATCATACATATGCCAGAAGAGATACAAGAGTTAATCAATCTCCAAAGCTTGACTCTCTGCTTCTATGAATATCGTGGCAAGAAAAGCAAACAGTATACTAGCTCAACAATTGTTCCTTATGGCGTGATCTCAAAACTCAGGGTGTTAAAACATTTAAGCCTTGATGTGAATCCCGATGATGAGCGGTGGTATGAGAATATACAAGTCATTCTACCAGAAATCTTGGTATTAGAATACTTGCAAACTATTCGACTGTATATTCCACAACCAGAACTATTGAAGTTCATTCCAGTCCAGATTTTAGAGCATGATTTCAGATTCGTTGTCGGACAGCATAAGTCACGGATCATATCAGGTACACCACCTATTGCTGAAGAAAAATTTAAACAAAGTGAGTGTAGCTTCAAATTTGCAAAAGGTGTTGATGTCCCCTATGGCATAAAAATGGTGGTTAGACGTAGCAAGGCTTTGTTCTTGGATCGACATATGACCATCAAGGATCTCTCTGAATTTGGCATGAGCAATTTAGAGCAACTGCAGGTGTGCATTTTGGCTGAATGTAAAGAGATGCAAACAATTCTTGATGGAAGACACTCAAATGGTGAGGATATCTTTTCACGTTTGCTACTGTTGAGCGTATCCTACATGAAGAATCTGAGAAGCATTTGGGAAGGACAAGTTCATTCTAGTAACTGTTTTGGTATGTTGAAGTCCCTAACACTGCATAATTGCCCTAAGTTAACAACTATTTTCACCTTAGATTTTTTGCACAATCTTTCACTCTTAAAGGTGCTTATAGTTAAAGATTGTCCCAAAATTTGTACCCTAGTAACTCTTGGATCATCAAAAGTCAAAGCAGGCACTTTTCTCCCTAAGTTAAGCACAATGTCACTCCTCCATCTTCCTGAATTGATCAGCGTTTCCAATGGATTACACATGGGTGTAAGTTTAGAAAATATAGGAATTTTTGACTGCCCAAAACTCCAGAGTCTTTCCAAGGTGGAACTGTCAAGCCAAAATTTGAGGGTCATCAGAGGAGAAACCAAGTGGTGGGAGGCGCTGAAATGGAGCGAAATTGAATGGGGAAGAGCAGGTCGATCACCTATGTTTGATAATATCTTTTCCCCAATTAACAATCATGCTGACATTGTGAGTCAATTAGAGGTGGATAATGATAATCATGACAGTCCAGGTGTGATAGTGGGTGAGCCATTACAAGCTTTTAGTGACATGTTGTTTGAAAAAAGTGACGCGGTCTTCAAAATCAAAAAGCAGCTTGCTATCCAGCCCCAGTGGAGATTGACAACGTCAACAAGCGTAACAGAGGAACTTCTACAGGATGGACATAGTTGGAGAAAATATGGCCAGAAAGTCATTCCTGGACTCAAATACCCCAGAAACTATTTCAGATGCGCTGACGATAAGGGCTGTAAAGCAAGAAAACAAGTGCAAAGACTTCAAGAGGAGCCTCCTCTAGCTTTCTCTTATCTCTTCCCTAGTGAGTTTGCTTCACCATCGTACCACGATTATTATCTGCTCAGCCCTGAATTCGCTTTTGATGATTAG 3081 0.3979 MDGQDRHMNIRNGKAQVFPKMESLDFPNREAVEAFGKTEPFDHFPKIEKLEPFGKTEPLDLPKTEKLKPLVKTKRLGFPRLVPFRKPKPQNFPKTKTMKQFGQPRFGSNSEEERKHLLLYLSRIRDFIMLMLNYPVRTDDYVLNIHHVMLSTRDGAEKRLVAERIKAALKDEDNMIRLRESFEGVLCIDASVYQRQVETHVRQQIAQQLQLPLIIKEDEEEGNGSWLITLRIAEQCGSHLLALAIVAISLKNAKNGELWNHAQGKLRWIRSSYDLSLFHGQSRVMVNSFINFIWHDISMTQKQCLTYCLFFPNIKDGKLKKEVISDWFSSQLVVAGQAQQNLKELVDRFALLQFKDTKSRYIQMPEDIYAILQSLNAQNPLFIKKAGFGLIKPPDSELWHSVVHIELAYNKLSELPLSPNCLQLKVLMLHNNADLTKIPPDFFFKMPLLCILDLSYTSITELPSSFFELEQLRELYMKGCEGFMKLAPQVGKLKKLEKLDLDKTQIIHMPEEIQELINLQSLTLCFYEYRGKKSKQYTSSTIVPYGVISKLRVLKHLSLDVNPDDERWYENIQVILPEILVLEYLQTIRLYIPQPELLKFIPVQILEHDFRFVVGQHKSRIISGTPPIAEEKFKQSECSFKFAKGVDVPYGIKMVVRRSKALFLDRHMTIKDLSEFGMSNLEQLQVCILAECKEMQTILDGRHSNGEDIFSRLLLLSVSYMKNLRSIWEGQVHSSNCFGMLKSLTLHNCPKLTTIFTLDFLHNLSLLKVLIVKDCPKICTLVTLGSSKVKAGTFLPKLSTMSLLHLPELISVSNGLHMGVSLENIGIFDCPKLQSLSKVELSSQNLRVIRGETKWWEALKWSEIEWGRAGRSPMFDNIFSPINNHADIVSQLEVDNDNHDSPGVIVGEPLQAFSDMLFEKSDAVFKIKKQLAIQPQWRLTTSTSVTEELLQDGHSWRKYGQKVIPGLKYPRNYFRCADDKGCKARKQVQRLQEEPPLAFSYLFPSEFASPSYHDYYLLSPEFAFDD 1026
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dere10g0347 1026 ProSiteProfiles WRKY domain profile. 945 995 IPR003657 GO:0003700|GO:0006355|GO:0043565
Dere10g0347 1026 MobiDBLite consensus disorder prediction 87 108 - -
Dere10g0347 1026 Gene3D Ribonuclease Inhibitor 351 589 IPR032675 -
Dere10g0347 1026 PANTHER NB-ARC DOMAIN-CONTAINING PROTEIN-RELATED 160 846 - -
Dere10g0347 1026 Gene3D WRKY domain 936 1001 IPR036576 GO:0003700|GO:0006355|GO:0043565
Dere10g0347 1026 Gene3D Ribonuclease Inhibitor 660 854 IPR032675 -
Dere10g0347 1026 MobiDBLite consensus disorder prediction 93 107 - -
Dere10g0347 1026 SUPERFAMILY WRKY DNA-binding domain 945 997 IPR036576 GO:0003700|GO:0006355|GO:0043565
Dere10g0347 1026 Pfam WRKY DNA -binding domain 951 995 IPR003657 GO:0003700|GO:0006355|GO:0043565
Dere10g0347 1026 SMART WRKY_cls 950 1011 IPR003657 GO:0003700|GO:0006355|GO:0043565
Dere10g0347 1026 Pfam Leucine rich repeat 423 480 IPR001611 GO:0005515
Dere10g0347 1026 SUPERFAMILY L domain-like 399 807 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dere10g0347 Dere-ChrDere10 6202260 6206578 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dere10g0347 948 1013 WRKY Transcription Factor Family AT4G39410 42.424 5.78e-13 69.3
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF WRKY Dere10g0347 LRR_8 1.6e-12 CL0022