Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dere10g0344 ATGAACTCCAGATCTGGTGAACTGGCACCAACAGACTCGCAGTTGCAGAAACCTTATCCGACGCCGTTTATACTGAAAACGTATCAAATCGTGGACGATCCTTTTGAAGATGACGTAATTTCCTGGAATAAAGATGGAACGAGTTTCATAGTTTGGAATCTACCTGAATTCGCTCGGGATTTGCTGCCTAGGTGTTTCAAACATAACAACTTTTCCAGTTTCCTCCGTCAACTTAGGAACTATGTTGCATCAGATCGTTGGGAATTTGCTCATGAGAGCTTTCGGAGAGGTGAAAAGTTTCTTCTTGGAAACATACAATGCAGGAAGATCAAATCACCGTGGATGCCGACGGCTACGGAGGGAAAATCGGCATCTCCATCCAACTCCGGCGACGAACAGAGAAAACATATTATTTCAAATGTAGGATTCCATATGGAGGGTATGAAATTAAGTAATAGCAAAGTGCATGTTCTTCCCAAAACGGAGCCACTTGATTTCCGCAAAATAGGTTCTGAGGAAACAAAGTCACCTGATATCTTCAAAATAGAAAAATCGGAGCCATTTGGAAAACTGATGCTACTTGAATTTTCAGAAGGAGAAAGGGAAGAGCTATTTGACAAACCAGAGCCATTTGATTTTCCAGAAACCAACAAAGCTAAGCAATTTGGTCAACCACTGTTTAAATCAAAGAGAATGCATTTGCTGTTGTGTTTAAGCAGGGTCAGAGATTTTATCAGGCTTTTGTTGAATTACCCTGTGCAAATAATGCATGATAGCAGACTTAAGCATTGGGTTCATGAAGCTTCAAATGAGAAACATTCAAATGGAGATTTATACCGTCTACTGAACGAGAAGCCACTTAAATGCTATGACGGACTTGTACCAAAGGAAATATTGGACGGCGTGGAAGCAGGAGAGAGTTCCATGTTTGCTGATAAAAATGTGATACCGGAAGCCATTTTCAACTTAGCTACTAATCTTGCTGTTGACCAACTTGTTCAGACCTTGCTTTCTGGGGATGATCATGTATGCAACATTCGCCATGTCATGTTATCTTCAACAAATGGAGCTGAGAAAAGAGTGGTTATGCAAAAAATAGAAGCCGCCTTGAAAGATCAGGATAATATGGTTCGTTTTAATGAAAAATTTCATGGAGTCTTATATATAAACGCCTCAGTTTATCAAAGCCAGGTGGAGGTCCATGTTCGACAGCAGATAGCTCAACAACTTCAGCTTCCAAAGATTGAAAAGGATGAAGTGGAAGGCAATGGCGATTGGCTGAGAAAAAGGATCGAAAAAGAGATGTCAAGACATAGATATTTAGTGCTTTTGGGGGATGGAGATGCTGAGGAGCCTTTAGATCCATGGGAGGTGGGTTTGCTTGCGGAAGAATTTGCGGGTGTTGCGGTGTTGATTACCACGGATTCTTCAAAGGATGCTAATAATGAACTAACAAGGGCAATGGATCTTAAAATTAGGACAATGGATCATTTATTGCCATGGGTGGTCTTCTGTCAGACTATAGGCTTTGAGCTTGTACGTTCATCCACATCCAGTGCCAAAAATAGAATTGCAGTGCGTATAGTTGAGGAGTGTGGTGGCCATCTTCTTGCAATCATCCTTGTGGCAAAGTCAATGAAGAATGTGGAAGATGTTAAACTCTGGGAACTTGCACTCAACAAATTGCGCTACCTTAATCCTTCCTATGATATGGATACGTTTCATGGTGTTAGTAAAGTCATGGTTAATGCATTTATAAACTTCATCTGGAATGATATTAGTCAAACGCAAAAGCATTGCCTCGCGAGTTGTTTATTCATCCCTGATGTCAAAATCAGTAAGCTTCATTATGAATTGATGTACCATTGGACTTCTTATCGGTTAATTGATGATGGAGAAGCTGAGCATATTCTAAGAGAGCTTGTAGAACGATCTATCTTAATGCAACTTGGAGGCTCAAAAGGCATGTATATCCAGTTGCCAGAAGAAACCCATAATGTTTTGCTTTCATTGAACACTCAAATCCCTTTATTCGTGAAGAGATCTGGGTTAGGGTTGATTGAGCCACCAAACGATGAGCTATGGCATAGTGCAGTACATATGGAACTTGGAGACAATAAATTGTCTGAGCTACCTTTGTCTCCAAACAGCCCTGACCTTAAAGTGTTAATGTTGAAAGGAAATCCTGATTTAACAAGAATCCCACCTATGTTTTTCTTTAACATGCCTCTGCTTTGGATTTTAGACTTATCTTATACAAGTGTAAGAGAACTACCAAACTCTCTTTTCAAGTTGGAGCAACTCAAAGAATTGTATTTGAAAGGTTGTGAATGCTTCATGAAATTATCACCAGAGATTGGAAAATTGAAGAAACTAGAGAAGCTCGATCTTGATGGAACTCAAATCATACATTTACCAGAAGAGGTGCAAGAGTTGACCAATCTTCAAAGCTTGATCCTTTGCTTCTATGAATATCGTGGCAAGAAAAACAAGCAATATACATGCTCAACAATTATTCCTTATGGGGTAATCTCAAAACTCAAGTGCTTAAAACATTTAAGCATTGATGTGAACCCTGATGATGAGCGGTGGTATGAGAATGCTTATGGTATTCTTCCAGAAATATTGGGATTAGAGTGTTTGCTATCGCTTAGCTTATATATCCCACATATTGAACTTTTGAAACTTATACCAGATTACATTTTTGAGATTGATTTTAGATATATTGTTGGCAAGCACATGCAAAGGATCATGTCGGCTACAGCACCCACATATGAAGCAAAATTTAAACAAAGTGATCATAGTTTAAAGTTCGTAAAAGGTGTTGATATTCCTGATGAAATTAAAAAGCTTGTTAGGCACAGCAAGGCTTTGTTCCTGGACCGACATATGACAATCAAGAATCTCTCTGAATTTGGACTGATGAATTTAGAGCAATTGCGTGTATGCATGTTGGCAGAATGTAAAGAAATGCAAACAGTTGTCAATGGAAGATACTCAAATAGTGATAATGGTATGATGTCACATTTACTATTCTTGAGTGTATCATACATGAATAATTTAAAATGCATATGGGAAGGGCCACCACCACGTCGCAGTTTTTTGGGTTTGTTGAAGTCGTTAGAATTCCACAACTGTCCTAAGTTAACAACTATCTTCACCTTGGATTTTTTGGGCAATCTTTCACTTTTAAAAGAGCTTATAGTTAAGGATTGTCCCAAAGTAAACACCTTGATAAGTGATGGACCCTTCAAACATAAAGCAGAGATTTGCCTTCCTAAATTGAAAAAGATGATACTCCTCCATCTTCCTGAGTTGGTCAACATTTCCAACGGATTTCACATGGGTCCAAGTTTAGAAAATATAGGAATTTATGATTGTCCGAAGCTTCAAAGCCTCTCTATGATGGAACTATCAAGCCAAAACCTGAAGGTCATAAAAGGAGAAACGAAATGGTGGAAATCATTGAAATGGAGCGAAGAAGAATGGGGAAAAGGAGGTCGGCCATCTAAGTTTGATTGCATCTTTTCCTCAATTGATACACAGGTTGACATAATGACTCAAATTTGGGGGGACGATGATATTGATGAAGTTCCAGATGGATCAGTGGGCGAGCTATGGATTAATAAGGGTCTCAAGAAAGAAGAGCCTAACGCCTATGGAAGATTCACTAGTAAGAAAACATTATTGCGCGGTCCTCGTCCCACTCCGCTCAATGTAAATCAAGAATCTTACAAGATCAAAAAGTCGCCGCTGCCACCGCACGCGGTCCAACCAGGGTCAAGGTTTTCCCAACGGCAACCGCCCCAGCCATTGATCATTGAAGTTTCGGTCCACAACTTCAGGGAGGCCGTGCAGCGTCTGACAGGACAATCGCCCCCGGGAGATGTTTCGCCGGTAGCGAGTCAAGAGACAAGCCCATTACCGAAAGAAAGGTTTCATAACAGAGATAACATGAAGAGTGTGTTGGAAGAAGTGGAAGTCAGTCAGTTCCCTGGGACGCCAGCCCCGACGACTCCACCGATGACACCATCAGAGATATTCTCAACGGTGACTAATACAGAAATGCTTTCTTGGTAG 4080 0.4027 MNSRSGELAPTDSQLQKPYPTPFILKTYQIVDDPFEDDVISWNKDGTSFIVWNLPEFARDLLPRCFKHNNFSSFLRQLRNYVASDRWEFAHESFRRGEKFLLGNIQCRKIKSPWMPTATEGKSASPSNSGDEQRKHIISNVGFHMEGMKLSNSKVHVLPKTEPLDFRKIGSEETKSPDIFKIEKSEPFGKLMLLEFSEGEREELFDKPEPFDFPETNKAKQFGQPLFKSKRMHLLLCLSRVRDFIRLLLNYPVQIMHDSRLKHWVHEASNEKHSNGDLYRLLNEKPLKCYDGLVPKEILDGVEAGESSMFADKNVIPEAIFNLATNLAVDQLVQTLLSGDDHVCNIRHVMLSSTNGAEKRVVMQKIEAALKDQDNMVRFNEKFHGVLYINASVYQSQVEVHVRQQIAQQLQLPKIEKDEVEGNGDWLRKRIEKEMSRHRYLVLLGDGDAEEPLDPWEVGLLAEEFAGVAVLITTDSSKDANNELTRAMDLKIRTMDHLLPWVVFCQTIGFELVRSSTSSAKNRIAVRIVEECGGHLLAIILVAKSMKNVEDVKLWELALNKLRYLNPSYDMDTFHGVSKVMVNAFINFIWNDISQTQKHCLASCLFIPDVKISKLHYELMYHWTSYRLIDDGEAEHILRELVERSILMQLGGSKGMYIQLPEETHNVLLSLNTQIPLFVKRSGLGLIEPPNDELWHSAVHMELGDNKLSELPLSPNSPDLKVLMLKGNPDLTRIPPMFFFNMPLLWILDLSYTSVRELPNSLFKLEQLKELYLKGCECFMKLSPEIGKLKKLEKLDLDGTQIIHLPEEVQELTNLQSLILCFYEYRGKKNKQYTCSTIIPYGVISKLKCLKHLSIDVNPDDERWYENAYGILPEILGLECLLSLSLYIPHIELLKLIPDYIFEIDFRYIVGKHMQRIMSATAPTYEAKFKQSDHSLKFVKGVDIPDEIKKLVRHSKALFLDRHMTIKNLSEFGLMNLEQLRVCMLAECKEMQTVVNGRYSNSDNGMMSHLLFLSVSYMNNLKCIWEGPPPRRSFLGLLKSLEFHNCPKLTTIFTLDFLGNLSLLKELIVKDCPKVNTLISDGPFKHKAEICLPKLKKMILLHLPELVNISNGFHMGPSLENIGIYDCPKLQSLSMMELSSQNLKVIKGETKWWKSLKWSEEEWGKGGRPSKFDCIFSSIDTQVDIMTQIWGDDDIDEVPDGSVGELWINKGLKKEEPNAYGRFTSKKTLLRGPRPTPLNVNQESYKIKKSPLPPHAVQPGSRFSQRQPPQPLIIEVSVHNFREAVQRLTGQSPPGDVSPVASQETSPLPKERFHNRDNMKSVLEEVEVSQFPGTPAPTTPPMTPSEIFSTVTNTEMLSW 1359
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dere10g0344 1359 Gene3D - 16 109 IPR036388 -
Dere10g0344 1359 SMART hsfneu3 19 108 IPR000232 GO:0003700|GO:0006355|GO:0043565
Dere10g0344 1359 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 379 604 IPR027417 -
Dere10g0344 1359 SUPERFAMILY L domain-like 685 1134 - -
Dere10g0344 1359 MobiDBLite consensus disorder prediction 1289 1313 - -
Dere10g0344 1359 Gene3D - 500 575 IPR042197 -
Dere10g0344 1359 PANTHER NB-ARC DOMAIN-CONTAINING PROTEIN-RELATED 349 1145 - -
Dere10g0344 1359 Pfam VQ motif 1269 1294 IPR008889 -
Dere10g0344 1359 MobiDBLite consensus disorder prediction 1327 1346 - -
Dere10g0344 1359 Gene3D Ribonuclease Inhibitor 682 872 IPR032675 -
Dere10g0344 1359 Pfam Leucine rich repeat 719 776 IPR001611 GO:0005515
Dere10g0344 1359 Gene3D - 328 487 IPR027417 -
Dere10g0344 1359 SUPERFAMILY "Winged helix" DNA-binding domain 20 106 IPR036390 -
Dere10g0344 1359 Gene3D Ribonuclease Inhibitor 932 1157 IPR032675 -
Dere10g0344 1359 PRINTS Heat shock factor (HSF) domain signature 23 46 IPR000232 GO:0003700|GO:0006355|GO:0043565
Dere10g0344 1359 PRINTS Heat shock factor (HSF) domain signature 61 73 IPR000232 GO:0003700|GO:0006355|GO:0043565
Dere10g0344 1359 Pfam NB-ARC domain 329 563 IPR002182 GO:0043531
Dere10g0344 1359 MobiDBLite consensus disorder prediction 1289 1305 - -
Dere10g0344 1359 FunFam Heat stress transcription factor B-4 15 109 - -
Dere10g0344 1359 Pfam HSF-type DNA-binding 23 106 IPR000232 GO:0003700|GO:0006355|GO:0043565
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dere10g0344 Dere-ChrDere10 6139556 6145222 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dere10g0344 16 133 HSF AT4G11660 52.482 1.94e-36 140
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF HSF Dere10g0344 NB-ARC 1.2e-12 CL0023