Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dere10g0341 ATGAAAAGAGCTAGGTTAGGGTTGATTGAGCCACCAGGCAGTGTGCTATGGCCTAGTGTTGTACATATTGAACTGCAAGACAATAAACTATCTGAGCTATCTTTGTCTCCAAATTGTTTTGAACTTAAAGTGTTAATGTTGCATAACAACCCTGACTTGATAAATATCCCACCCCATTTTTTCTTCAAAATGCCTCTACATTGCATCGTGGACTTATCTTACACTAGTGTTGGAGGATTGAAGAAACTTGAGAAGCTTGATCTTGACAAGACTCAAATCATACATATGCCAGAAGAGATACAAGAGTCGACCAATCTCCGAAGCTTGACTCTTTGCTTTTATGAATATCGTGGCAAGAAAAGCAAATACCTTGATGTGAATCCTAATGATAAGCGTTGGCATGAGAATATACAAGTCATTCTACGAGAAATCTTGGTATTGGAATGCTTGCAAACTTTTAGTCTCTTCATTCCACAACCAGAACTTTTGAATTTCGTACAAGCCCAGATTTCAGAGCATGATTTCAGATTCGTTGTTGGCCAGCATATGTCACGGATTATATCAGATACACTGCCTAATGCTGAAGAAAAGTTTGAACAAAGTGAGTGTAGCTTGAAATTTGTAAGAGGTGTCGATGTTCCCTATGAAATAAGAAAGGTGGTTAGACATAGCAAGGCTTTGTTCTTAGAACGACAAATGACCATCAAGGATCTCTCTGAATTTGGCATGAGCAACTTAGAGGAATTGCAGGTCATCAAAGGACAAACCAAGTGGTGGGACGCACTAAAATGGAGGGAAGAAGAATGGGGAAATACTGGTCGACCTTCTAAGTTTGATTGCATCTTTTCCTCAATTAACAATGAGGTTGACGTTATAAGCCAATTAGCAGTTGATGACAGTATTGATAACTGTCCAGATACCAATACAAAAAGTGGGATAGTGGATGAGCCATGGAAGACTTCTAATGAGAAGGTCTTCAAGGACAAAAAGCATAATGCCAACACGAAGAGAATCCATTACGGATGCACCGATGAGGGCTGTAGAGCAAGAAAACAAGAGCAGAGAATTGAAGAGGAGCCTGCCCTGTACTTGACCACCTATAATGGCCATCACACTCGCAGATACCTACTAAAGCCTGACATTGATGTAGATTTTGCTTCTCCTTCAGAATCTTCCACACGTAGCTTTGTGAACACTCTTCCAAGGGAACAAGACCGCCCCTTATTTCCATCGTCTTCCCTAAGGAAATAG 1251 0.4045 MKRARLGLIEPPGSVLWPSVVHIELQDNKLSELSLSPNCFELKVLMLHNNPDLINIPPHFFFKMPLHCIVDLSYTSVGGLKKLEKLDLDKTQIIHMPEEIQESTNLRSLTLCFYEYRGKKSKYLDVNPNDKRWHENIQVILREILVLECLQTFSLFIPQPELLNFVQAQISEHDFRFVVGQHMSRIISDTLPNAEEKFEQSECSLKFVRGVDVPYEIRKVVRHSKALFLERQMTIKDLSEFGMSNLEELQVIKGQTKWWDALKWREEEWGNTGRPSKFDCIFSSINNEVDVISQLAVDDSIDNCPDTNTKSGIVDEPWKTSNEKVFKDKKHNANTKRIHYGCTDEGCRARKQEQRIEEEPALYLTTYNGHHTRRYLLKPDIDVDFASPSESSTRSFVNTLPREQDRPLFPSSSLRK 416
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dere10g0341 416 Gene3D WRKY domain 311 375 IPR036576 GO:0003700|GO:0006355|GO:0043565
Dere10g0341 416 SUPERFAMILY L domain-like 7 119 - -
Dere10g0341 416 SUPERFAMILY WRKY DNA-binding domain 318 373 IPR036576 GO:0003700|GO:0006355|GO:0043565
Dere10g0341 416 ProSiteProfiles WRKY domain profile. 337 376 IPR003657 GO:0003700|GO:0006355|GO:0043565
Dere10g0341 416 Gene3D Ribonuclease Inhibitor 2 310 IPR032675 -
Dere10g0341 416 MobiDBLite consensus disorder prediction 388 416 - -
Dere10g0341 416 Pfam WRKY DNA -binding domain 331 372 IPR003657 GO:0003700|GO:0006355|GO:0043565
Dere10g0341 416 SMART WRKY_cls 327 375 IPR003657 GO:0003700|GO:0006355|GO:0043565
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dere10g0341 Dere-ChrDere10 6109707 6111945 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dere10g0341 302 372 WRKY Transcription Factor Family AT5G22570 37.838 1.99e-07 50.4
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF WRKY Dere10g0341 WRKY 4.2e-07 CL0274