Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dere10g0324 ATGTCTGAAGAAGCTAGCCCAATGTTGGTGGTTTATGATGACCCGTCGGACCAACGATCACTATCTTTGGATGATACAAGCAGCACTGAGGAATCACCAGATGAAACCAGGCTCTCGTTGGAAACCACTAATGATTCAATTCCATATATTGGGCAAAGATTTAGCACTCATGATGCTGCTTATGAATTTTATAGTGAATTTGCCAAGCGATGTGGGTTCTCAATTCGACGTCACCGTACAGAGGGAAAAGATGGTGTTGGAAAAGGACTTACTAGACGCTACTTTGTTTGTCATCGTGCTGGTAACACTCCAGTCAAAACATCAACTGAAAGTAAACCTCAAAGAAATCGAAAGTCTTCCCGATGTGGATGCCAGGCTTACATGCGTATAAGCAAGACAACAGAATTAGGTGCTCCTGAATGGCGTGTCACTGGTTTTGCCAACCACCATAATCATGAACTTTTAGAACCGAACCAAGTTCGATTCCTTCCCGCATATAGAACTATTTCAGATTCAGACAAAAGCCGAATCCTGATGTATGCTAAAACGGGAATTTCTGTGCATCAAATGATGCGGCTTATGGAGCTTGAGAAGTGTGTGGAACCTGGATATCTGCCTTTCACTGAGAAGGATGTGAGGAATTTACTTCAGTCATTTAGGAAATTAGATCCAGAAGAGGAAAGCATAGATTTATTAAGAATGTGCAGGAACATTAAGGAGAAAGACCCTAATTTCAAATTTGAGTTCACACTTGATACAAATAACTGTTTGGAGAATATAGCCTGGTCATATGCTTCATCGATACAGTCATATGATATCTTTGGTGATGCTGTGGTATTTGATACGACACATCGCCTGACTGCATTTGACATGCCGCTGGGTATATGGGTTGGAATGAATAATTATGGAATGCCTTGCTTTTTTGGCTGTGTTCTACTACGAGAAGAAAACTTGAGGTCATATTCCTGGGCGTTGAAGGCATTCTTAGGGTTTATGAATGGGAAGGCTCCACAGGCAATATTGACTGACCAAAATATGTGTCTCAAAGAAGCATTAGCCATGGAAATGCCAACAACCAAACATGCTCTCTGCATATGGATGATTGTAGCAAAGTTTCCTTCTTGGTTTAGTGCTGTTCTAGGAGAACGTTACAATGAGTGGAAGGCTGAATTTTATAGACTTTACAATCTTGAGTCAGTTGAGGATTTTGAACTGGGATGGAGGGATATGGTCAGTTCTTTTGGGCTGCATGCCAGCAGGCACATTGCTAATTTATATAGTTTACGCACCCTATGGGCATTGCCATTTTTGCGAAGTCATTTTTTTGCTGGAATGACCACAACTGGTCAGTCAAAGTCAATTAATGCTTTCATTCAACGGTTTCTGAGCGCACAGACTCGGCTTGCACACTTTGTGGAACAGGTGGCTGTTGCTGTGGATTTCAAAGATCAAACTGGAGAACAACAAACTATGCAACAGAATCTCCAAAATATTTGCCTCAAAACTGGAGCCCCCATGGAGTCACATGCTGCCACTATTCTCACTCCTTTTGCCTTTTCAAAGCTTCAAGAACAACTTGTTTTGGCTGCACATTATGCATCTTTTCCATTTGAAGATGGTTTCCTTGTGAGGCACCATACAAAAGCTGAGGGAGGTCGGAAAGTGTATTGGGCCCCTCGGGAAGGAATTATAAGTTGCAGTTGCCACCAGTTTGAGTTCTCTGGAATTCTCTGTCGGCATGCTCTTAGAGTTCTTTCAACTGGAAATTGCTTTCAGATCCCAGATAGATATCTTCCTTCCCGATGGCGTCGAATCAGCCTGACCTCCATGAAGCTTATTCACAGTACACCTAATGATCATGCTGAAAGAGTACAGTTATTACAAAATATGGTTTCTTCTCTTATCTCAGAATCTGCCAAGTCAAAGGAAAGATTGGAAATTGCAACAGAACAAGTATCCATCCTTCTGTCTCGAATAAGGGAGCAACCAGTTTCATTACAAGGTGTTAGAGATATTTCTGGGATTGGTAGGAATCTTTGA 2040 0.4172 MSEEASPMLVVYDDPSDQRSLSLDDTSSTEESPDETRLSLETTNDSIPYIGQRFSTHDAAYEFYSEFAKRCGFSIRRHRTEGKDGVGKGLTRRYFVCHRAGNTPVKTSTESKPQRNRKSSRCGCQAYMRISKTTELGAPEWRVTGFANHHNHELLEPNQVRFLPAYRTISDSDKSRILMYAKTGISVHQMMRLMELEKCVEPGYLPFTEKDVRNLLQSFRKLDPEEESIDLLRMCRNIKEKDPNFKFEFTLDTNNCLENIAWSYASSIQSYDIFGDAVVFDTTHRLTAFDMPLGIWVGMNNYGMPCFFGCVLLREENLRSYSWALKAFLGFMNGKAPQAILTDQNMCLKEALAMEMPTTKHALCIWMIVAKFPSWFSAVLGERYNEWKAEFYRLYNLESVEDFELGWRDMVSSFGLHASRHIANLYSLRTLWALPFLRSHFFAGMTTTGQSKSINAFIQRFLSAQTRLAHFVEQVAVAVDFKDQTGEQQTMQQNLQNICLKTGAPMESHAATILTPFAFSKLQEQLVLAAHYASFPFEDGFLVRHHTKAEGGRKVYWAPREGIISCSCHQFEFSGILCRHALRVLSTGNCFQIPDRYLPSRWRRISLTSMKLIHSTPNDHAERVQLLQNMVSSLISESAKSKERLEIATEQVSILLSRIREQPVSLQGVRDISGIGRNL 679
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dere10g0324 679 MobiDBLite consensus disorder prediction 1 43 - -
Dere10g0324 679 Pfam MULE transposase domain 278 370 IPR018289 -
Dere10g0324 679 Pfam SWIM zinc finger 560 587 IPR007527 GO:0008270
Dere10g0324 679 ProSiteProfiles Zinc finger SWIM-type profile. 553 589 IPR007527 GO:0008270
Dere10g0324 679 SMART 26again6 564 591 IPR006564 GO:0008270
Dere10g0324 679 Pfam FAR1 DNA-binding domain 62 155 IPR004330 -
Dere10g0324 679 PANTHER PROTEIN FAR1-RELATED SEQUENCE 10-RELATED 42 654 IPR031052 GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dere10g0324 Dere-ChrDere10 5839092 5841848 Dispersed/Transposed
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF FAR1 Dere10g0324 MULE 9.9e-18 CL0219