Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dere10g0299 ATGGTATCTGTGGTGCTTCTGCTCATAAACTATTTGTTGATTGCATTTGCAGAATCATCAGCCGAAGGGGATGTGAAAGCTCTCAGTTCTCTTAAGATGAACATGCAGAACGCACCTCAAAGTTGGGAGGGTTCGGATCCCTGTGACGGTTGGGAGGGAATCAGCTGCATCGAATCACGTGTTACTTCCATAAAATTACCAGGCATGGATTTAAACGGTGAGCTTTCTGGAGATATTGGATTACTCTCTGAATTACGGACTTTGGATCTCTCTTACAATAAGAACCTAGTAGGACCACTTCCACTAGCTATTGGAAATTTGAAGAAGCTGACAGAATTATTTCTTGTTGGTTGTGGTTTCACTGGCCATATTCCAGATGAAATTGGATCATTACCAGAGCTTGCCTTCTTATCTTTAAACTCTAACAGCTTCACTGAAAGAATTCCACCCTCTATTGGCAATCTATCAAAACTTAAATGGTTAGATCTAACGGACAATCAACTTGTGGGACCTATCCCAGTATCAAATGGAACTACTTCTGGTTTAGATATGCTACTCAAAGCAGAGCACTTTCATCTTGGGAACAATAACCTTGCAGGAGAAATTCCTCCAAAACTTTTCAGCTCGAAAATGGCTCTGATACATTTGCTTTTGGACCACAATCAACTTACTGGCAGCATTCCTTATACACTTGGACTTGTTCAGACTCTAGAGGTGGTGCGCTTAGAATATAATTCATTATCTGGCACTGTACCTCAGAGCCTGAGCTATCTTGGGAATGTTACAGACCTGATCTTGTCCAACAATAAGCTAGATGGTGCATTACCAGACCTTGGTGGAATGGCTAATCTCGACTACTTGGTGCTGGAAGACAACAAACTTAGTGGAAATTTGGCCATTGGCACCAACTACAGCAAACAACTGCAACTGATTGATTTGCAGAATAATAATATTGAGAGTTTTAACATACCAAAAGAAGCCACCACACAGATCAAAATATTACTTGCACACAACTTGGCTTGTTATGAAACAGGTTTTCAAACAAGCCCTTTCTGCTCCAAGCGTGATTGGTCACATACAAATCCACCCAAAAACTGTGCCCCTGTTACATGCAGTGATCCAGATCAGAGTTCTAGCCCCAAATGCAAATGCGCACATCCATATACAGGAACTTTGTTTTACAGAGCTCCTTCTTACATGGTTCTGGAAAACAAAATTTCCCTCGAGGAAAGTCTTCTGCAAATATTTCTATCTGATCATCTACCTGTGGACTCAGTTTCTGTGATCAATCCACTTTGTGCTACATTTCAGTGTTTTAAATTAATCATAAAAGTCTTCCCTTCAGGCCAAGATCATTTCAATGAAACAGTCATGTCTGAATTGAGCTTGCTGCTAAGCAACCTGAGTACAACAAAACCTTATACTTTTATTCCTGATCCTGATAACTATGGACTTAAAAGTTCAAGTAAATCATCAAATCTCGGCATCATAATTGGAGCAGCAGTTGGTGGTTCTGTCTTGCTTGTGTTATTTCTCCTAGCAGGCATTTATGCTTTCTGCCAAAAGAGAAGGGCAGAAAAAGCAATTGAACAAAGCAATCCATTTGGACATTGGGATCTGAGTGACAACAAAAGTACCAAACCTCAGTTACATGGTGCAAGGCAGTTCTCTTTTGAAGAACTTAAGAAATGCACAAAAAATTTCTCACAGGTCAATGATATTGGATCTGGGGGTTATGGGAAGGTTTTTCGAGGAGTTCTTCCCAATGGTCATCTGGTTGCAATAAAACGAGCTCAAAAACAATCAAAGCAAGGGGGACTTGAGTTTAAAGCTGAAATTGAACTTCTTTCAAGAGTCCACCATAAGAACCTGGTTAGCCTTGTGGGATTCTGCTACGAGCGAGGGGAACAAATGCTGGTTTATGAATTTGCTCCTAATGGAAATCTGAAGGATAGCATCTCAGGGAAGTCAGGGATAATATTGGACTGGACTAGAAGGCTTAAAGTTGCCCTTGGTGCTGCTAGGGGTTTGGCATATCTTCATGTACATGCCAGTCCACCTATAATACACAGGGACATAAAATCAACCAACATTTTGCTGGATGAACACTTGAATGCAAAAGTTGCTGATTTTGGTCTTTCCAAGCCTATGGAAGATTGTGAAAAAGATCATGTTACTACGCAAGTTAAAGGAACAATGGGCTACTTGGATCCAGATTATTATACGAGTCAACAGTTGACCGAGAAGAGTGATGTTTACAGCTTTGGAGTGCTAATGTTGGAGTTGATAACAGCAAGAAAACCAATACAAGGGGGGAAACATATTGTGAAAGTGGTTAGGAATGCAATTGATAAGACAAAAGACTTGTATGGTCTTCATGAAATTCTTGACCAAGCTCTCAATTTAGGGCCCACATTGAAGGGATTCAAGAGTTTTGTGGATCTTGCAATGAAGTGTGTCGAAGATTCAGGGGCTGACAGACCTACAATGAACGATGTGGTGAAAGAAATAGAAAGCATGTTGAAGTCAGCTGGTTTGAATCCCACAGCTGAATCATCAGCTTCCAATTCAGCTAGTTATGAGGAGGTAAGTAGTGAGACTTCCATGCTTCCCTACAGCAATGAGTACTTTGATTCATGTGCAGTACTTCAACATCAGAAAGTTGAACCTAAGTAA 2676 0.4058 MVSVVLLLINYLLIAFAESSAEGDVKALSSLKMNMQNAPQSWEGSDPCDGWEGISCIESRVTSIKLPGMDLNGELSGDIGLLSELRTLDLSYNKNLVGPLPLAIGNLKKLTELFLVGCGFTGHIPDEIGSLPELAFLSLNSNSFTERIPPSIGNLSKLKWLDLTDNQLVGPIPVSNGTTSGLDMLLKAEHFHLGNNNLAGEIPPKLFSSKMALIHLLLDHNQLTGSIPYTLGLVQTLEVVRLEYNSLSGTVPQSLSYLGNVTDLILSNNKLDGALPDLGGMANLDYLVLEDNKLSGNLAIGTNYSKQLQLIDLQNNNIESFNIPKEATTQIKILLAHNLACYETGFQTSPFCSKRDWSHTNPPKNCAPVTCSDPDQSSSPKCKCAHPYTGTLFYRAPSYMVLENKISLEESLLQIFLSDHLPVDSVSVINPLCATFQCFKLIIKVFPSGQDHFNETVMSELSLLLSNLSTTKPYTFIPDPDNYGLKSSSKSSNLGIIIGAAVGGSVLLVLFLLAGIYAFCQKRRAEKAIEQSNPFGHWDLSDNKSTKPQLHGARQFSFEELKKCTKNFSQVNDIGSGGYGKVFRGVLPNGHLVAIKRAQKQSKQGGLEFKAEIELLSRVHHKNLVSLVGFCYERGEQMLVYEFAPNGNLKDSISGKSGIILDWTRRLKVALGAARGLAYLHVHASPPIIHRDIKSTNILLDEHLNAKVADFGLSKPMEDCEKDHVTTQVKGTMGYLDPDYYTSQQLTEKSDVYSFGVLMLELITARKPIQGGKHIVKVVRNAIDKTKDLYGLHEILDQALNLGPTLKGFKSFVDLAMKCVEDSGADRPTMNDVVKEIESMLKSAGLNPTAESSASNSASYEEVSSETSMLPYSNEYFDSCAVLQHQKVEPK 891
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dere10g0299 891 ProSitePatterns Serine/Threonine protein kinases active-site signature. 688 700 IPR008271 GO:0004672|GO:0006468
Dere10g0299 891 Pfam Protein kinase domain 569 835 IPR000719 GO:0004672|GO:0005524|GO:0006468
Dere10g0299 891 SUPERFAMILY Protein kinase-like (PK-like) 554 867 IPR011009 -
Dere10g0299 891 ProSiteProfiles Protein kinase domain profile. 568 841 IPR000719 GO:0004672|GO:0005524|GO:0006468
Dere10g0299 891 FunFam Leucine-rich repeat protein kinase family protein 537 643 - -
Dere10g0299 891 FunFam Leucine-rich repeat family protein 23 177 - -
Dere10g0299 891 PANTHER RECEPTOR-LIKE PROTEIN 55 34 841 - -
Dere10g0299 891 CDD STKc_IRAK 574 840 - -
Dere10g0299 891 SMART serkin_6 568 841 IPR000719 GO:0004672|GO:0005524|GO:0006468
Dere10g0299 891 FunFam Leucine-rich repeat protein kinase family protein 178 277 - -
Dere10g0299 891 FunFam LRR receptor-like serine/threonine-protein kinase HSL2 644 854 - -
Dere10g0299 891 MobiDBLite consensus disorder prediction 845 864 - -
Dere10g0299 891 ProSitePatterns Protein kinases ATP-binding region signature. 574 596 IPR017441 GO:0005524
Dere10g0299 891 Gene3D Phosphorylase Kinase; domain 1 538 643 - -
Dere10g0299 891 Gene3D Ribonuclease Inhibitor 182 339 IPR032675 -
Dere10g0299 891 SUPERFAMILY L domain-like 55 339 - -
Dere10g0299 891 Gene3D Ribonuclease Inhibitor 21 181 IPR032675 -
Dere10g0299 891 Gene3D Transferase(Phosphotransferase) domain 1 644 862 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dere10g0299 Dere-ChrDere10 5430820 5442185 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dere10g0299 2 891 Receptor kinase-like Gene Family AT5G49760 49.582 0.0 823
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-VIII-1 Dere10g0299 Pkinase 1.7e-47 CL0016