Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dere10g0298 ATGATGGTTGAGAGGATACTGGTGTTTCTGGTTCTTGTTTTCAATTATCTGCTGGTTGCAGTCACAGAAACAGCTCAAGAGGATTTCAAAGCCCTAAACTCTCTTATAGATACCTGGGAGAACACACCACTCAGTTGGTCTGGTTCGGATCCTTGTGGCGATGATTGGGTTGGAATCAAGTGCACAAACTCTCGTGTCGCTTCCATAAAATTACCAGGCATGAATTTGATTGGCCAGCTATCTGGAGATATTGGTTCACTATCTGAATTAGATACCTTGGATCTCTCTTACAACAAGGGCTTAACTGGTTCACTTCCACCAGAAATTGGAAAATTGAAGAATCTATCCAACCTGTTTCTTGTTGGCTGTGGTTTCACTGGTCCTATTCCAGCTAGTATAGGATCTTTACAGCAACTTGTCTACTTATCTTTAAATTCCAACAAGTTTTCCGGGAAAATTCCTCCTTCAATTGGTAATCTATCAAATCTAGTTTGGCTAGATTTAACTGAAAATGAGCTTGAAGGACCCATCCCAGTATCAAGTGGCAGTACACCTGGTCTTGATAAGCTACTCAACGCAAAGCACTTTCATCTTGGGAAGAACAAGCTTTCAGGGACAATTCCTCGTCAACTTTTTAGCACGGAAATGACTCTAATACATGTGCTTTTTGACAGAAATCAACTTGAAGGCAGCATTCCATCTTCACTTGGACTTGTTCAGAGTCTGGAGCTGGTGCGCTTTGATAGTAATTCATTGAGTGGATCTGTGCCTCAAAACATCAACAATCTTACACATGTTACAGAGATGTACTTGTCCAACAATAATCATTCTGGTCATATGCCAAACCTGAGTGGAATGAATTTCCTCACATACCTTGATATGAGCAACAATAGCTTTGATCCATCAGATTTCCCGTCATGGCTTTCAACTCTGAGGAATTTGACAACATTAAAGATGGAGCACACACAACTTACAGGGCAGATTCCTGTTTCTTTGTTCAGCCTACCCAATTTACAGAATGTGGTGCTAAAGCACAATGATCTCAATGGCACCTTGGACATTGGCACCAACTACAGCAAGCAACTAAACCGAATTGAATTGCAGGATAATGTTATTGACAACTTTATGCAACATGATGGGGTCTCCAATATCAACATAATACTTGCGAACAATCCAGTTTGTCATGAAACGGGAGCAACACAAAGTTTGTGCACCAATTTGCCAGACAATATAACATATACAGCACCACCATCAAGTATCTGTCTTCCTGGTACCTGCAGCTCAGATCAGACTCTTAGTCCCACCTGCAAATGTGCATATCCATATATGGGAATTTTAACTTTTAGAACACCTTCCTTCCTAGACTGGGAAAAGACAGTATCCTTTGAGAAATCTCTAATGCAACAGTTTAAAGATAATCATCTACCTGTGGATTCAGTTTCTTTGGGAAATCTGACCAAGAATCCATTTCAAGATCTTGAATTGAGCATACAAATCTTCCCATCAGGCCAAGACCATTTTGACCGAGTGGAGATTTCTAGTATAACCTCTCTCCTAAGCAACTCGACCATTTATCCATTCTATTTCACTGCCTACATATATACACACTATGAACCTATGGAATCAAGTAAATCACCAAAAGTTGCCTTCACAACTGTAGCAGCAATTGGTGGTTCTGTTGTGCTAGTGTTGCTACTCCTTGCTGGCATTTATGCTTTACACCAAAAGAAAAGGGCAGAAAAAGCACTTGCTAAAAGCAATCCTTTTAGACATTGGGTTTCCAATGACAGCAAAAGTATGACCCCTCACTTGAAGGGAACAAGGCAATTCTCTTTTGTAGAGCTCCAGAAATACACCAGAAATTTTTCACAAGCCAATACTATAGGACTTGGCGGTTATGGAAAGGTTTATCGTGGGACGCTTTCCAATGGGCAACTGGTAGCCATAAAACGAGCTCAAAGAGAATCTAAGCAAGGAAGGCTAGAGTTTAAAGCAGAGATTGAACTTCTGTCCAGGGTCCACCATAAGAACCTTGTAAGCCTTGTGGGGTTCTGCTTTGAAAGAGAAGAACAAATGTTGGTTTATGAGTATGTCCCAAATGGAACTTTACGTGACGCTCTCTCAGGGAAATCAATAATTAGGTTGGACTGGAAGAGAAGGCTTAAGGTTGTCCTTGGGACAGCTAGGGGTTTGGCTTATCTTCATGAACATGCCAATCCTCGTATCGTACACAGGGACATCAAGTCCAATAACATTCTTCTGGATGAGCGCTTGAATGCCAAACTTGCTGATTTTGGTCTCTCCAAGCCTATGCTTGATTGTGAAAAAGATCATGTCACCACTCAAGTCAAAGGAACAATGGGCTATCTGGATCCAGAGTATTACACAACTGAGCAGCTAACTGAAAAGAGCGATGTTTATAGCTTCGGAGTGCTAATGTTGGAGCTGATAACTGCAAGAAAACCAATTGAAAAAGGGAACTACATTGTGAAAGTGGTCAGGAATTCAATAGACAAGACAAAAGCCCTGTACGGTCTTCATGAACTTCTTGACCCACTCATTGGTCTAAGTTCAACACTGACGGGTTTAGAGAATTTTGTGGATGTCTCAATGAAGTGTCTTGCAGATTCCGGTGCAAACAGGCCTACAATGAACGATGTGGTAAAAGATATCGAACACATATTGCAGTTAGCTGGTTTGAACACCCCTGCTGAATCAGTAGCTTCTTCATCTTGCTATGAAGAGATCACTTATGGGAGTTCCCAGAATTCTTACAGTAACGTCATCTTTGAGTCTAGTCCAGTACCTTTAGAACCCAGAAATTGA 2826 0.4112 MMVERILVFLVLVFNYLLVAVTETAQEDFKALNSLIDTWENTPLSWSGSDPCGDDWVGIKCTNSRVASIKLPGMNLIGQLSGDIGSLSELDTLDLSYNKGLTGSLPPEIGKLKNLSNLFLVGCGFTGPIPASIGSLQQLVYLSLNSNKFSGKIPPSIGNLSNLVWLDLTENELEGPIPVSSGSTPGLDKLLNAKHFHLGKNKLSGTIPRQLFSTEMTLIHVLFDRNQLEGSIPSSLGLVQSLELVRFDSNSLSGSVPQNINNLTHVTEMYLSNNNHSGHMPNLSGMNFLTYLDMSNNSFDPSDFPSWLSTLRNLTTLKMEHTQLTGQIPVSLFSLPNLQNVVLKHNDLNGTLDIGTNYSKQLNRIELQDNVIDNFMQHDGVSNINIILANNPVCHETGATQSLCTNLPDNITYTAPPSSICLPGTCSSDQTLSPTCKCAYPYMGILTFRTPSFLDWEKTVSFEKSLMQQFKDNHLPVDSVSLGNLTKNPFQDLELSIQIFPSGQDHFDRVEISSITSLLSNSTIYPFYFTAYIYTHYEPMESSKSPKVAFTTVAAIGGSVVLVLLLLAGIYALHQKKRAEKALAKSNPFRHWVSNDSKSMTPHLKGTRQFSFVELQKYTRNFSQANTIGLGGYGKVYRGTLSNGQLVAIKRAQRESKQGRLEFKAEIELLSRVHHKNLVSLVGFCFEREEQMLVYEYVPNGTLRDALSGKSIIRLDWKRRLKVVLGTARGLAYLHEHANPRIVHRDIKSNNILLDERLNAKLADFGLSKPMLDCEKDHVTTQVKGTMGYLDPEYYTTEQLTEKSDVYSFGVLMLELITARKPIEKGNYIVKVVRNSIDKTKALYGLHELLDPLIGLSSTLTGLENFVDVSMKCLADSGANRPTMNDVVKDIEHILQLAGLNTPAESVASSSCYEEITYGSSQNSYSNVIFESSPVPLEPRN 941
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dere10g0298 941 ProSitePatterns Serine/Threonine protein kinases active-site signature. 742 754 IPR008271 GO:0004672|GO:0006468
Dere10g0298 941 SMART serkin_6 622 895 IPR000719 GO:0004672|GO:0005524|GO:0006468
Dere10g0298 941 Gene3D Transferase(Phosphotransferase) domain 1 698 907 - -
Dere10g0298 941 Gene3D Phosphorylase Kinase; domain 1 593 697 - -
Dere10g0298 941 FunFam Leucine-rich repeat protein kinase family protein 183 282 - -
Dere10g0298 941 Gene3D Ribonuclease Inhibitor 283 401 IPR032675 -
Dere10g0298 941 CDD STKc_IRAK 628 894 - -
Dere10g0298 941 ProSitePatterns Protein kinases ATP-binding region signature. 628 650 IPR017441 GO:0005524
Dere10g0298 941 Pfam Protein kinase domain 623 889 IPR000719 GO:0004672|GO:0005524|GO:0006468
Dere10g0298 941 FunFam Leucine-rich repeat family protein 27 182 - -
Dere10g0298 941 SUPERFAMILY L domain-like 45 383 - -
Dere10g0298 941 FunFam LRR receptor-like serine/threonine-protein kinase HSL2 698 907 - -
Dere10g0298 941 FunFam Leucine-rich repeat protein kinase family protein 588 697 - -
Dere10g0298 941 ProSiteProfiles Protein kinase domain profile. 622 896 IPR000719 GO:0004672|GO:0005524|GO:0006468
Dere10g0298 941 SUPERFAMILY Protein kinase-like (PK-like) 599 891 IPR011009 -
Dere10g0298 941 Gene3D Ribonuclease Inhibitor 23 181 IPR032675 -
Dere10g0298 941 Gene3D Ribonuclease Inhibitor 182 282 IPR032675 -
Dere10g0298 941 PANTHER RECEPTOR-LIKE PROTEIN 55 37 894 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dere10g0298 Dere-ChrDere10 5415049 5423236 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dere10g0298 8 920 Receptor kinase-like Gene Family AT5G49760 53.348 0.0 909
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-VIII-1 Dere10g0298 Pkinase 2.5e-47 CL0016