Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dere10g0295 ATGGCTACTGAAAGGGGTGATGGGGTTGCAGATAATAAGCTAAAGCTATATTCGTATTGGAGGAGCTCATGCGCCTTCCGGGTCCGAATTGCTCTCAGCCTGAAAGGGCTAAAGTATGAGTACAAAGCAGTTAATTTATTGAAGGGAGAACAATCTGACCCCGAATTTCTGAAGCTCAATCCTGTTGGTTTTGTTCCTGTTCTTGTGGATGGGGACGTAGTAATTTCTGATTCCTTTGCCATCGTTATGTATTTGGAGGAGAAGTTTACTCAGCGTCCGTTGCTGCCTCGTGATATTCAGAAAAGAGCAATCAATTACCAGGTTGCCAATATTGTTTCCTCATCTATACAGCCTCTGCAAAACTTGACTGTACTGAATTACATTGAGGAAAAAGTTGGCCCTGATGAAAAGCTTCCTTGGGTCAAAAGTGTTATAAATAAAGGCTTCACAGCAATTGAAAAACTATTGAAAGGCCATGCAGGAAAATATGCAACTGGAGATGAAGTTTTCCTGGCAGATTTGTTTTTAGCACCCCAATTCTATGCGGCAACGAAGTTCAACATTGACATGACGGAGTTCCCTATTCTGGCAAGAATCAAGGAGACATACAATGAGGTCCCAGCAATTCGAGACGCTTCACCGCATATCCAGCCGGATGCTCCCTCTCAAGGAGTCTAG 678 0.4336 MATERGDGVADNKLKLYSYWRSSCAFRVRIALSLKGLKYEYKAVNLLKGEQSDPEFLKLNPVGFVPVLVDGDVVISDSFAIVMYLEEKFTQRPLLPRDIQKRAINYQVANIVSSSIQPLQNLTVLNYIEEKVGPDEKLPWVKSVINKGFTAIEKLLKGHAGKYATGDEVFLADLFLAPQFYAATKFNIDMTEFPILARIKETYNEVPAIRDASPHIQPDAPSQGV 225
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dere10g0295 225 CDD GST_C_Zeta 100 217 IPR034330 -
Dere10g0295 225 CDD GST_N_Zeta 14 86 IPR034333 -
Dere10g0295 225 Gene3D - 98 223 - -
Dere10g0295 225 FunFam Glutathione S-transferase Z1 12 96 - -
Dere10g0295 225 ProSiteProfiles Soluble glutathione S-transferase C-terminal domain profile. 98 222 IPR010987 -
Dere10g0295 225 PANTHER MALEYLACETOACETATE ISOMERASE 14 220 - -
Dere10g0295 225 FunFam Maleylacetoacetate isomerase 97 223 - -
Dere10g0295 225 SFLD Main (cytGST) 14 198 - -
Dere10g0295 225 SUPERFAMILY GST C-terminal domain-like 93 221 IPR036282 -
Dere10g0295 225 Gene3D Glutaredoxin 11 97 - -
Dere10g0295 225 ProSiteProfiles Soluble glutathione S-transferase N-terminal domain profile. 12 93 IPR004045 -
Dere10g0295 225 Pfam Glutathione S-transferase, N-terminal domain 13 86 IPR004045 -
Dere10g0295 225 Pfam Glutathione S-transferase, C-terminal domain 132 209 IPR004046 -
Dere10g0295 225 NCBIfam maleylacetoacetate isomerase 15 220 IPR005955 GO:0003824|GO:0005737|GO:0009072
Dere10g0295 225 SFLD Glutathione Transferase (cytosolic) 14 198 IPR040079 -
Dere10g0295 225 SUPERFAMILY Thioredoxin-like 11 97 IPR036249 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dere10g0295 Dere-ChrDere10 5403173 5407017 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dere10g0295 13 222 Glutathione S-transferase Gene Family AT2G02380 64.455 3.94e-99 286