Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dere10g0291 ATGTTTCCGAGACTAATACACCCCCATGAAGGCATTATTGACGAGTTGGAGGTTGGTTCGAACCACAGCGATCACAAGGGGGACCCATGTCTGGTTTTGACTACCGATCCCAAACCTCGCCTCCGATGGACGCAGGACCTCCATGAACGATTTGTCGATGCTGTCACTCAGCTCGGGGGTGCTAGTAGTAAGCAGGCTGTGTCTTGTAGCAGTCTATTGGTTTTGGGTTTGATACTATCTGCAGAAGCTACACCAAAAGCAATCATGCGGACCATGAATGTCAAGGGTTTAACTCTCTTTCATTTAAAGAGCCATCTTCAGAAATACAGACTTGGTAAGCAATCATGGAAAGATTTGGGTGAAGGATGCAAAGATGGCTCATATCTTCTAGAAAGCCCCGGTACTGATAACTCCTCTCTGATGTTGCCAACTTCTGATACAAATGAGGGTCATGAAATCAAAGAGGCACTGAGAATTCAGATGGAAGTACAAAGTAAACTTCATTTGCGAGTAGAGGCAGAGAAGCACTTGCAGATACGCAAGGATGCAGAGTGGAGATATATGGCGATGCTTGAAGGAGCTTGCAAAATGCTGGCTGATCAATTTATCAGTGCAACAGTTATAGAGCCAGACAGCCAAAAATTTCAAGACCATGGAAGTAAAGTGCCAGGAGGCTCCTTGCTTGATCCTCTTGGCTTTTACTCCTTACCATTGGCTGAGGCAGCTGGAGAGCAAGTCTCGGGCTAA 747 0.4605 MFPRLIHPHEGIIDELEVGSNHSDHKGDPCLVLTTDPKPRLRWTQDLHERFVDAVTQLGGASSKQAVSCSSLLVLGLILSAEATPKAIMRTMNVKGLTLFHLKSHLQKYRLGKQSWKDLGEGCKDGSYLLESPGTDNSSLMLPTSDTNEGHEIKEALRIQMEVQSKLHLRVEAEKHLQIRKDAEWRYMAMLEGACKMLADQFISATVIEPDSQKFQDHGSKVPGGSLLDPLGFYSLPLAEAAGEQVSG 248
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dere10g0291 248 Pfam MYB-CC type transfactor, LHEQLE motif 152 197 IPR025756 -
Dere10g0291 248 NCBIfam myb-like DNA-binding domain, SHAQKYF class 38 62 IPR006447 GO:0003677
Dere10g0291 248 NCBIfam myb-like DNA-binding domain, SHAQKYF class 81 112 IPR006447 GO:0003677
Dere10g0291 248 Gene3D - 37 114 - -
Dere10g0291 248 SUPERFAMILY Homeodomain-like 37 114 IPR009057 -
Dere10g0291 248 PANTHER MYB FAMILY TRANSCRIPTION FACTOR PHL11 21 216 IPR044848 GO:0003700
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dere10g0291 Dere-ChrDere10 5357278 5361207 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dere10g0291 27 226 G2-like Transcription Factor Family AT3G24120 47.343 6.11e-55 176
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF GARP-G2-like Dere10g0291 Myb_CC_LHEQLE 3.2e-15 No_clan