Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dere10g0290 ATGTATCAACTGAAGAGTGTTCCTAGTTCAAGTCTAGTTGGCAACAACCTGTTAGTTCATGGTCAGCATTTAGATTGTGGTGGTAGCACAATGGATCCTCTTAATGGAGGTAACAATCCAACCAACAACTCTAATCTCAGCTCAAAGCAACGCTTACGTTGGACACATGAGCTGCACGAACGTTTTGTTGATGCTGTGGCACAACTTGGTGGGCCAGATCGTGCCACACCTAAAGGTGTCCTCCGAGTTATGGGTGTACAAGGCTTAACAATATATCATGTTAAAAGCCATTTACAGAAATATCGACTTGCAAAGTACCTCCCTGACTCCTCATCTGATGGAAAAAAAGCCGAAAAGAAAGAAACAGGGGACATGCTTTCCAATCTAGATGGCTCATCTGGTGGGATGCAAATTACTGAAGCACTAAAGCTACAGATGGAGGTGCAGAAGCGACTACATGAACAATTAGAGGTGCAGAGACAGCTACAATTACGGATAGAAGCCCAGGGTAAATACTTGAAGAAGATAATTGAAGAGCAGCAGCGGCTCAATGGGGTTCTGTCAGAAGCACCTGGCTCAGGCGGGGATGCTCCAGTATTGGCTGATGTTAGCCAGGAACCTGAGAATAAGACTGACCCGGCAACCCCTGCCCCAACCTCTGAGTGCCCCCTCCAAGATAAAGCTGCCAAAGAACGTGCCCCGGCAAAGAGTCTATCTATTGATGAATCATTTTCATCTCCCCATGAACCATTGACTCCTGATTCTGGTTGCAATGTCGATTCCCCTACTGACAGCCCTATAGAGGAGAGATCAACGAAGAAGCAGCGGGTGAGCGTGGAGGGAGCATATTCTAAAACAGAAATGATGCTTCCACATCAGATACTGGAGTCAACCATGTCATCATACCAGCAACCCGACAATGTTTTCCTTACCAGAGAGCAGTTTGATCCGTCAATGGGTATATCTGCTAGAAGTGAGGAGGCATTAGAAAAGGTTGGTGGTAGCCATCTCTGA 1014 0.4635 MYQLKSVPSSSLVGNNLLVHGQHLDCGGSTMDPLNGGNNPTNNSNLSSKQRLRWTHELHERFVDAVAQLGGPDRATPKGVLRVMGVQGLTIYHVKSHLQKYRLAKYLPDSSSDGKKAEKKETGDMLSNLDGSSGGMQITEALKLQMEVQKRLHEQLEVQRQLQLRIEAQGKYLKKIIEEQQRLNGVLSEAPGSGGDAPVLADVSQEPENKTDPATPAPTSECPLQDKAAKERAPAKSLSIDESFSSPHEPLTPDSGCNVDSPTDSPIEERSTKKQRVSVEGAYSKTEMMLPHQILESTMSSYQQPDNVFLTREQFDPSMGISARSEEALEKVGGSHL 337
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dere10g0290 337 MobiDBLite consensus disorder prediction 109 125 - -
Dere10g0290 337 MobiDBLite consensus disorder prediction 187 278 - -
Dere10g0290 337 Pfam MYB-CC type transfactor, LHEQLE motif 136 182 IPR025756 -
Dere10g0290 337 NCBIfam myb-like DNA-binding domain, SHAQKYF class 49 104 IPR006447 GO:0003677
Dere10g0290 337 Pfam Myb-like DNA-binding domain 52 102 IPR001005 -
Dere10g0290 337 MobiDBLite consensus disorder prediction 108 132 - -
Dere10g0290 337 FunFam Myb family transcription factor 48 106 - -
Dere10g0290 337 SUPERFAMILY Homeodomain-like 47 103 IPR009057 -
Dere10g0290 337 Coils Coil 139 159 - -
Dere10g0290 337 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 46 106 IPR017930 -
Dere10g0290 337 Gene3D - 48 107 - -
Dere10g0290 337 PANTHER MYB FAMILY TRANSCRIPTION FACTOR PHL11 43 327 IPR044848 GO:0003700
Dere10g0290 337 MobiDBLite consensus disorder prediction 239 265 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dere10g0290 Dere-ChrDere10 5308617 5311793 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dere10g0290 84 337 G2-like Transcription Factor Family AT2G01060 66.926 8.78e-101 295
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF GARP-G2-like Dere10g0290 Myb_DNA-binding 2.2e-08 CL0123