Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dere10g0271 ATGTCCGATCTGGCCCAATCCTTTGGACTCGTCAACATCAGCGACAAACTTAATGGTAATAACACTCATCGGAAGCTTCTGTCGGAGAGTTTGTCGTCGTGGATAAGTCAAGGCCAACGCCACCGTCTCCTTCAGGCAGCCGTCAATGGTCCTGCAGGAATTAAGTCCGACGTGGTTAAGTCAATGAGTTATGTCACTATCATCGGAGATGGTCCCACACTTACCAGATTCACCAGAAACCTCAACTTTGTGGATGGTGTCCAAACTTACAAAGCTGCAACATTTGGCGTGAATGCTCCTTACTTCACGGCCATGCACGTGGGGTTTGAGAACTCAGCAGGAGCAGATAAGCACCAGGCGGTGGCTCTCCAGCACGGTCTAAGGTCGCACGCACTTTATCCCAATGCAGAGCCTTTAACTTGGGTTTTCCTCCATGCATATCATCCATTTCCTCGATGCACGTGGGAAGCCGCTCCTTCACTTGGAGACCAAGATTGTTGCTTTCTTGACGCAGAGGATGAGGTAACACTAATTGCCGGAGACACTGTTTTCCTTGGTGTTGTTTTTGGCAGCGGCGGTGGCGGTGGAGGAGGGGGCGGAGGGGGTCTAAGTGAAATCCACGAGGTGTCCTGGGGGGTGTTATGGACCGGAGGTCGCTTGTTTATCCCTGTGGCGATGATCGCTATGGTGAATGAAACGGCATTTCATGGCTTTCTTCGTCCGACGAGGACGACGAAGAAGACACCGCCGGTGGGAAATTCCCATCCAGAGGCTTACTTAGGGGCGGCAATGGCTGCAATTCAGGACTTGGACGGTATCCTTCGGATCGCTTTACAGGACGGTGCATTTTGA 852 0.5188 MSDLAQSFGLVNISDKLNGNNTHRKLLSESLSSWISQGQRHRLLQAAVNGPAGIKSDVVKSMSYVTIIGDGPTLTRFTRNLNFVDGVQTYKAATFGVNAPYFTAMHVGFENSAGADKHQAVALQHGLRSHALYPNAEPLTWVFLHAYHPFPRCTWEAAPSLGDQDCCFLDAEDEVTLIAGDTVFLGVVFGSGGGGGGGGGGGLSEIHEVSWGVLWTGGRLFIPVAMIAMVNETAFHGFLRPTRTTKKTPPVGNSHPEAYLGAAMAAIQDLDGILRIALQDGAF 283
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dere10g0271 283 Pfam Pectinesterase 57 126 IPR000070 GO:0030599|GO:0042545
Dere10g0271 283 PANTHER PECTINESTERASE 58 126 - -
Dere10g0271 283 SUPERFAMILY Pectin lyase-like 56 126 IPR011050 -
Dere10g0271 283 Gene3D - 55 133 IPR012334 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dere10g0271 Dere-ChrDere10 5107615 5109519 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dere10g0271 25 154 Carbohydrate Esterase AT5G49180 37.778 1.31e-16 77.8