Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dere10g0257 ATGCATGTGCGAAAGAAGCAACAAAGCTGCACGCACAGATCTGTGAGCTGTGGAATCCGTCCCATCCCAACATCCTTGTCAGGGAAAGAGAAAGCTTTAAATGCAACAACAGGAGGTCAAAGGTTTGGTTGGGCTCAGATCGGCGAAACCATAAGCAAGTTTTGCTGCTTTGGCTTAGGCTTAACAACAAATCAGAAAGGAGCTGAGGCTCAGACCTACTCAGGCTTTGCTTTTGAAAGCGTTCTCTGCAACTGCAAAAAGCTTAAGCGAGGGCCTCTCCTTCCTGACTTGGACTGTGATATATCGCTTGAACTTCTGTTTCACAAAAGGCATGATTGTGGTATGGAGGAGGATGGGATTCATGCACAACCGTGTAAATTTCCAAGAATTGAAAATGGAAATGGCACACACGACTCCTCCAACAAGATAGGTTCCAATATTAACGAAGAAAATGGAGAGCTCGGAAAAAGAAATGGTGGAGGAGGCAGCGATGGAAGCACCAATCGATTCCACAGTTGGCACCACCACTCTTCTCGAATCATTAGGGTTTCTCGAGCCTCCGGAGGGAAAGATCGGCACAGCAAGGTCATGACTTCGAAGGGATTAAGAGACCGAAGGGTTCGGCTCTCTGTGACCACGGCGATCCAATTCTACGACCTTCAAGATCGTCTGGGTTACGACCAACCCAGTAAAGCCGTGGAGTGGTTAATCAAAGCAGCTTCTGATTCAATTTCTGAGCTCCCTTCTCTGAAGACGTTTCCCGAGACCCCAAAGCAACCCAACGATGAGAAGAGGGGAGGTGAAAAATGTTTCGATTTAGCCGATGCAGAAGTAGATGGTGAGGCCAAATATCATCAGCAGAACCAGAACCAGAGTCAAAATCTTTCCTTGTCAAAGTCTGCTTGTAGTAGCACTTCGGAGACAAGCAAAGGCTCCGGTTTGTCCCTGTCGCGGTCTGAGATTCGCGTCAAAGCACGCGAGAGGGCGAGGGAGAGAACGGCAAAGGAGAAGGATAAAGAGAATGACGAATCTTGCAATATTGCTCATCAGCAGAATAATGTGATCTCAATTGCTCAAACTTCTTTTACTGAGCTTCTCACAGGTGGGATTAACAGTAGTGTTCCAGCTACCACTAGTCCTACTGGGTCAGCTCAACAGAATCATCATCGCAGCGATGAGGCTGATCTATTCAATAAAGGAGCTAGACAGCAATGGAGTTCAACACCTATGGACTACTTTAGCTCAGGGCTTCTTGGACCTTCGTCTTCCTCAAGAACCCACAATCAATCTATTGGGTTTTCAGGGCAGATCCAATTAGGAAATTCTCTTCCTCAGGCAATACGCCTAGCAGCAGTGGCGGGGGCGGTGGGGGGAGCGAGTACAATCTCAACTTCACCATCTCTTCTTCTTCCGGCGGCCTTGCTGGTTTCAATAGTAGGGGGACCCTTCAGTCCAATTCTCCGTCTGTCTTGCCTCATCATCTGCAGAGGTTTTCACCTTTAG 1503 0.4784 MHVRKKQQSCTHRSVSCGIRPIPTSLSGKEKALNATTGGQRFGWAQIGETISKFCCFGLGLTTNQKGAEAQTYSGFAFESVLCNCKKLKRGPLLPDLDCDISLELLFHKRHDCGMEEDGIHAQPCKFPRIENGNGTHDSSNKIGSNINEENGELGKRNGGGGSDGSTNRFHSWHHHSSRIIRVSRASGGKDRHSKVMTSKGLRDRRVRLSVTTAIQFYDLQDRLGYDQPSKAVEWLIKAASDSISELPSLKTFPETPKQPNDEKRGGEKCFDLADAEVDGEAKYHQQNQNQSQNLSLSKSACSSTSETSKGSGLSLSRSEIRVKARERARERTAKEKDKENDESCNIAHQQNNVISIAQTSFTELLTGGINSSVPATTSPTGSAQQNHHRSDEADLFNKGARQQWSSTPMDYFSSGLLGPSSSSRTHNQSIGFSGQIQLGNSLPQAIRLAAVAGAVGGASTISTSPSLLLPAALLVSIVGGPFSPILRLSCLIICRGFHL 500
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dere10g0257 500 MobiDBLite consensus disorder prediction 282 346 - -
Dere10g0257 500 ProSiteProfiles R domain profile. 319 337 IPR017888 -
Dere10g0257 500 MobiDBLite consensus disorder prediction 375 394 - -
Dere10g0257 500 MobiDBLite consensus disorder prediction 283 316 - -
Dere10g0257 500 MobiDBLite consensus disorder prediction 248 267 - -
Dere10g0257 500 Pfam TCP family transcription factor 188 338 IPR017887 -
Dere10g0257 500 ProSiteProfiles TCP domain profile. 189 247 IPR017887 -
Dere10g0257 500 MobiDBLite consensus disorder prediction 133 152 - -
Dere10g0257 500 MobiDBLite consensus disorder prediction 320 345 - -
Dere10g0257 500 MobiDBLite consensus disorder prediction 130 169 - -
Dere10g0257 500 PANTHER TRANSCRIPTION FACTOR TCP4-RELATED 159 437 IPR005333 GO:0003700
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dere10g0257 Dere-ChrDere10 4932017 4934742 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dere10g0257 168 418 TCP Transcription Factor Family AT4G18390 53.668 2.22e-66 216
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF TCP Dere10g0257 TCP 5.7e-41 No_clan