Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dere10g0240 ATGTTAGAGAGTGGTGGTTTTGGTCGTGATTCCGAGCTTAGTTTCGAGGGTCTGAGTTCAACCCAGCGTAGTTCCATGAGCAGCGAAAGCATTTGTAGCACCAGTTTCAGCCGTCTCTCCTTCGAACTCCTTCCTACCTCGCCGGAGAGCCTCTCACTCAAGCCTCACCGGTCGTCCGACTTCGCCTACTCCGCCATCCGCTCCGCTACGTTCCGCCGCAAGACCGGCCTCACCTTCCGGGACTTCCATCTCCTCCGTCGCATCGGCGCCGGCGACATCGGCACCGTCTATCTCTGCCGCCTCCGCAACAACGGCGCCGCCGATGACGATCGGTTTGTACCCTGCGAAGAAGACGACGTTGTTGTCAACAACGAGGACGATGGTTGCTGCTTCTACGCCATGAAGGTGGTGGATAAAGAAGCCGTGGCATTGAAGAAGAAGGCGGAGAGAGCGGAGACGGAGAGGAAGATTCTGAAGATGCTGGATCACCCGTTCCTCCCTACGCTCTACGCCGAGTTCGAGGCTTCACATTTCTCTTGCATTGTGATGGAGTTTTGCTCCGGTGGGGACTTGCACTCCCTACGCCACAGGCAGCCTCAGAAGCGATTCCCTCTCTCCTCTGCAAGGTTTTATGCTGCTGAGGTTCTCGTGGCATTAGAGTACCTCCACATGCTGGGAATCATATACAGAGATCTGAAACCTGAGAACGTGTTAGTTAGATCCGACGGCCACATCATGCTCTCCGATTTTGATCTCTCGATGTGCTCCGACGCAATCCCAGCCGTTGAATCCTCTGACCTATCCCCAGATCCTGCGTTCCCAGACGCATTATCCTACACCCGCCCGCGCTCCAGGCCATTCTCGTGCCTCCCGAACCGGGTGTTCCGGTCCCGCAAGGTGCAAACCCTTCAACCGAACCGGCTTTTCGTGGCCGAGCCGGTGTCAGCCAGGTCATGCTCCTTCGTCGGGACCCACGAGTACGTCTCGCCGGAAGTCGCCTCCGGCAACTCCCACGGCAACGCTGTCGACTGGTGGTCCTTTGGGATATTCATCTACGAGCTCATCTACGGCAGAACGCCGTTTGCGGCCCCATCGAACGAGGCCACCCTGCGAGGCATCGTAAAGAAGCCCCTGACCTTCCCTACCGCCGCGCCCTCCAGCACGCTTGAGCTCCACGCGCGGGACCTGATATCCAGGTTGCTGAACAAGGACCCGACCCTGAGGCTAGGGTCTAAGCGCGGGGCGGCGGACGTGAAGAAGCACGCGTTCTTCAAAGGCCTGAACCTGGCGTTGATACGGATGATGACGCCACCGGAGGTGCCGGGGCTTAGAAGGCAGAAAACGACGCCGTTGGTTCCTGTGAAGGCAAACAGAAGTAGAACTAGCAGGAGACAACACCACCTCCAGCCAACGGCGTCGTTTGATTACTTCTGA 1434 0.5795 MLESGGFGRDSELSFEGLSSTQRSSMSSESICSTSFSRLSFELLPTSPESLSLKPHRSSDFAYSAIRSATFRRKTGLTFRDFHLLRRIGAGDIGTVYLCRLRNNGAADDDRFVPCEEDDVVVNNEDDGCCFYAMKVVDKEAVALKKKAERAETERKILKMLDHPFLPTLYAEFEASHFSCIVMEFCSGGDLHSLRHRQPQKRFPLSSARFYAAEVLVALEYLHMLGIIYRDLKPENVLVRSDGHIMLSDFDLSMCSDAIPAVESSDLSPDPAFPDALSYTRPRSRPFSCLPNRVFRSRKVQTLQPNRLFVAEPVSARSCSFVGTHEYVSPEVASGNSHGNAVDWWSFGIFIYELIYGRTPFAAPSNEATLRGIVKKPLTFPTAAPSSTLELHARDLISRLLNKDPTLRLGSKRGAADVKKHAFFKGLNLALIRMMTPPEVPGLRRQKTTPLVPVKANRSRTSRRQHHLQPTASFDYF 477
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dere10g0240 477 FunFam protein kinase PINOID 186 254 - -
Dere10g0240 477 Gene3D Phosphorylase Kinase; domain 1 80 185 - -
Dere10g0240 477 FunFam serine/threonine-protein kinase D6PK-like 316 442 - -
Dere10g0240 477 Pfam Protein kinase domain 125 254 IPR000719 GO:0004672|GO:0005524|GO:0006468
Dere10g0240 477 Pfam Protein kinase domain 318 424 IPR000719 GO:0004672|GO:0005524|GO:0006468
Dere10g0240 477 ProSitePatterns Serine/Threonine protein kinases active-site signature. 227 239 IPR008271 GO:0004672|GO:0006468
Dere10g0240 477 Coils Coil 134 161 - -
Dere10g0240 477 Gene3D Transferase(Phosphotransferase) domain 1 317 442 - -
Dere10g0240 477 SMART serkin_6 82 424 IPR000719 GO:0004672|GO:0005524|GO:0006468
Dere10g0240 477 PANTHER FLIPPASE KINASE 1-RELATED 23 445 - -
Dere10g0240 477 MobiDBLite consensus disorder prediction 456 477 - -
Dere10g0240 477 Gene3D Transferase(Phosphotransferase) domain 1 186 254 - -
Dere10g0240 477 SUPERFAMILY Protein kinase-like (PK-like) 61 447 IPR011009 -
Dere10g0240 477 FunFam protein kinase PINOID 2 80 185 - -
Dere10g0240 477 ProSiteProfiles Protein kinase domain profile. 82 424 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dere10g0240 Dere-ChrDere10 4635888 4637839 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dere10g0240 10 477 AGC Kinase Gene Family AT2G34650 65.042 0.0 573
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK AGC_RSK-2 Dere10g0240 Pkinase 5.3e-30 CL0016