Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dere10g0208 ATGACGTCCCGTACTGGGACTTCCGGCGGCAAGACCCGTGTGGGAAAGTACGACCTGGGTCGGACGCTGGGGGAGGGCAATTTCGCCAAGGTCAAGCTTGCCCGCAATGTCGAGACCGGAGAGAATGTGGCCATTAAAATTCTTGACAAGGAAAAGATTCTCAAGCACAAGATGATTCATCAGATAAAGCGAGAAATTTCAACAATGAAACTGATTAGGCATCCAAATGTCATACGTATGTATGAGGTGATGGCTAGCAAGACAAGGATATATATTGTACTTGAATTTGTGACTGGTGGAGAACTGTTTGATAAAATTTCAAGCAAGGGGATGTTGAGGGAAGATGAGGCAAGGAAATATTTTCAGCAGCTTATATGTGCCGTGGATTACTGTCATAGTAGAGGTGTTTGCCATAGAGACTTAAAGCCTGAAAATTTGTTGCTGGATGCTAATGGAATGCTTAAAGTTTCAGATTTCGGATTGAGTGCTCTGCCTCAACAACTTCGAGAAGATGGGTTGCTACACACTACATGCGGTACGCCAAATTATGTTGCCCCGGAGGTGATCCACAATAAGGGCTACGATGGTACAAAGGCAGATCTTTGGTCATGTGGTGTTATTCTTTTTGTTTTAATGGCTGGTTACTTGCCCTTTGAAGATACTAACCTTACGGCTTTATATAAAAAGATATACAAGGCTGATTTCACATGTCCTTCATGGTTCTCGTCAAGTGCAAAGAAATTAATCAAGAGAGTGCTTGATCCCAATCCTGCAACACGAATTACAATCACTGAGGTCATTGAGAATGATTGGTTTAAGAAGGGATATGTGCCTCCTAGATTCGAGAAGGCTGATGTTAGTCTTGATGATGTGAATGATATTTTCAGTGAATCAGTGGATTCTCAAAATCTTGTTGTTGAGAAGCGAGAAGCAAGGCCAGCGGCAGCGGCACCTATGTCTTTGAATGCTTTTGAGCTTATCTCTACGTCTCAGGGCCTCAACCTTAGTAGTCTTTTTGAGAAACAAATGGGACTCGTTAAAAGGGAAACAAGATTCACATCCAGATGTTCAGCGAATGAGATAATTTCAAAAATTCAGAAAGCTGCAACACCTCTGGGTTTTGATGTTAAGAGGAATAATTGCAAGTTAAAGATTCAAGGAGAAAAGAGTGGACGTAAAGGACATCTATCTGTTTCAACTGAGATATTCGAGGTGGCCCCTTCGCTTTGCATGGTTGAGCTGCGCAAGTCTGGAGGAGATACTCTGGAATTTCATAAGTTCTACAAGAACCTAGCAACTGGGCTGAAAGATATCGTTTGGAAAGCAGAACCTATAGATGAAGAAACAGATGGTGCTAGCGCATCAACATAG 1371 0.4238 MTSRTGTSGGKTRVGKYDLGRTLGEGNFAKVKLARNVETGENVAIKILDKEKILKHKMIHQIKREISTMKLIRHPNVIRMYEVMASKTRIYIVLEFVTGGELFDKISSKGMLREDEARKYFQQLICAVDYCHSRGVCHRDLKPENLLLDANGMLKVSDFGLSALPQQLREDGLLHTTCGTPNYVAPEVIHNKGYDGTKADLWSCGVILFVLMAGYLPFEDTNLTALYKKIYKADFTCPSWFSSSAKKLIKRVLDPNPATRITITEVIENDWFKKGYVPPRFEKADVSLDDVNDIFSESVDSQNLVVEKREARPAAAAPMSLNAFELISTSQGLNLSSLFEKQMGLVKRETRFTSRCSANEIISKIQKAATPLGFDVKRNNCKLKIQGEKSGRKGHLSVSTEIFEVAPSLCMVELRKSGGDTLEFHKFYKNLATGLKDIVWKAEPIDEETDGASAST 456
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dere10g0208 456 Gene3D Phosphorylase Kinase; domain 1 6 96 - -
Dere10g0208 456 Gene3D Kinase associated domain 1, KA1 316 441 - -
Dere10g0208 456 SMART serkin_6 17 272 IPR000719 GO:0004672|GO:0005524|GO:0006468
Dere10g0208 456 FunFam Non-specific serine/threonine protein kinase 8 96 - -
Dere10g0208 456 CDD STKc_SnRK3 16 271 - -
Dere10g0208 456 Pfam NAF domain 318 377 IPR004041 GO:0007165
Dere10g0208 456 FunFam Non-specific serine/threonine protein kinase 315 441 - -
Dere10g0208 456 ProSitePatterns Protein kinases ATP-binding region signature. 23 46 IPR017441 GO:0005524
Dere10g0208 456 ProSiteProfiles Protein kinase domain profile. 17 272 IPR000719 GO:0004672|GO:0005524|GO:0006468
Dere10g0208 456 Pfam Protein kinase domain 17 272 IPR000719 GO:0004672|GO:0005524|GO:0006468
Dere10g0208 456 PANTHER CALCIUM/CALMODULIN-DEPENDENT PROTEIN KINASE KINASE-RELATED 13 426 - -
Dere10g0208 456 CDD CIPK_C 322 437 - -
Dere10g0208 456 Gene3D Transferase(Phosphotransferase) domain 1 97 277 - -
Dere10g0208 456 SUPERFAMILY Protein kinase-like (PK-like) 14 286 IPR011009 -
Dere10g0208 456 ProSiteProfiles NAF domain profile. 316 340 IPR018451 GO:0007165
Dere10g0208 456 ProSitePatterns Serine/Threonine protein kinases active-site signature. 136 148 IPR008271 GO:0004672|GO:0006468
Dere10g0208 456 FunFam Non-specific serine/threonine protein kinase 10 312 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dere10g0208 Dere-ChrDere10 4251946 4257678 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dere10g0208 2 448 CBL-interacting serine-threonine protein kinases AT1G01140 65.563 0.0 634
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CAMK_CAMKL-CHK1 Dere10g0208 Pkinase 1.3e-76 CL0016