Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dere10g0204 ATGGGAATGGGAATCCCAAGCGACGATTCAATTTTATATTACTGTGGGCTTCGATATCTGTTTTGCACATTTGGAAGCTTCTGCAGATGGAAGGGTTTGAAGACCTTCCGTTACAATATTGAAATGATGAGTTTTGCTATGGGAGTTGGTGGGAGTGGGGGTGATCAAGAGCCTGATAACTCTGGCAAGGGAAAGAAGGTCTACCATCGTCATACTCCCTATCAGACATCTCAACTTGAAGCATTTTTCAAGGAGTGCCCACATCCAGATGAAAACCAACGTCGCCAATTGGGCATGGAGCTTGGGCTTGAGCCAAAACAAATCAAGTTTTGGTTTCAGAATAAGAGGACTCAAACGAAGACTCAAAATGCGCGAGCAGATAATGCTATGCTTCGGGCTGAAAATGAAAGGATGCAATGTGAAAACGTAGCATTCAGAGAGGCACTAAAGAACTTAGCTTGCCCATCTTGTGGGGGTCAACCCTATGGGGAAGAAGAGCTTGAGCATCATCTGCAAAAGCTGCAGCAAGAAAATGATGAACTAAAACAAGAGTATGAAAGAGTATCAAACCTTCTTGCAAAGTGCATTGGCAGACCAATATCAGAACTAGAGTCAGTAGCTCCTGCCTTGGGAACTTCATTGGATCTGTCACCAAGAAATTCCCTAAACCAAGAGATTGGAAGTCCTAATGCTGATGTGGATTTTACTTCAGCTCTTACAGTTTCTGTTGATGATATCTTTCCCACCTTAATGGGAGAAGTTACAGATGTGGAAAAGGATCTAATGTTAGAGGCTGCTACTAGTGCCATGGATGAATTATGTAGGCTTATGCATATCAATGAGCCCTTATGGGTCAAGACTGCTGCTGATGGACAATTCGTGCTCCATTGTGAGAGTTATGAAAAGATATATCCTAGGCCTAATCACTTCAAAAGCTCCGGTGCACGAGGAGAAGCAACAAAAGATTCACGAATAGTTTGCATGAATGGAATGCAATTGGTTGACATGTTGTTAGATTCGGACAAATGGGTTAATCTTTTCCCAACAATTGTTAGAAAAGCTCAAACAATTGAAGTGCTTGATGTTGGATCATCAGAAAATCGATCTGGAGCCTTGCAGCTGATGTATGAAGAAATGCACATTCTTTCACCTTTAGTGCCACCTCGCGAATTCTGCTTTATTCGCTACTGTCAACAAGTTGAAGCAGGTGTCTGGGTAATAGTGGATGTGTCATTTGATTCCCTAAGAGATAGCATCCCTATTTCTCATACTTGGAAGTTTCCGTCTGGTTGCATGATTCATGAAATGCCTAATCAGTTCTCCAAGGTTACTTGGGTTGAACATGTTGAGGTAGATGATAAAAACCAAACTCACAGGCTATATAGAGATCTTGTTTGGGGCAATTTTGCATATGGAGCGGAAAGATGGGTTGTTACACTCCAAAGAATGTGTGAAAGATTTGTATACGCCTTGGATGAAAATATACCAAGCGAAGAAGCTCAAGGAGTGGTCACTTTAGGTGATGGAAGGAGGAGCATTATGAACCTTGCTCATCGAATGGTTAAGGACTTTTGTGGAATTTTAAACATGTCTGGCAAGGACTTCCCTCATTTATCTGAGTCAAGTAATAGTGGTGTGAGGGTGTCAGTTCGGAAAAACACAAATCCAGGTCAGCCAGACGGCATGGTTGTCAGTGCTGCTACCTCCCTCTGGCTTCCGCTTCCGCAACAGACTGTTTTTGACTTCTTCAAAGATGAAAAAAGACGCATTCAGTGGGATATTCTTTCCTCTGGAAACCCAGAGCATGAAATTGCACACATCTCAAATGGAACCCATCCTGGGAACTGTATATCACTTATTCGGCCTTTCATCCCTGCAGACAACAATGTGCTGATTCTTCAAGAAACTTGCACAGATCCATCAGGATCTTTGGTCGTGTATGCTCCGGTCGATGTACCATTGATAAATATGGCGGCAAGGGGAGAGGACACTTCGCTGGTGCCAATTCTTCCATCAGGCTTTGTAATCTCTGGGGATGGCCGGCCTAACCCTAGCCCAGTTGCCAGAGCATCCAGCAGTTCAAATGTAGGAGGTTCAGGAGGAACTCTTCTCACAGTGGCTTTCCAGATACTGGTTTGCAGCTCAGCGGCAATGAGGCAATTGAATATTGAAACTGTGGCCACAATCAACACACTCATAAGCTCAACTGTCCAGAAGATTAAGGATGCTTTGAACTGTGCAGATGTACTTAAGAGTGGAAGATGGGGTGTTGGAACCCACTTGGTAAAAGATGAATTTATTGATGAAGTAACAGAATACTTTCCTTTAGGCAAGAAAGTAATACAACCAGACTCAGAAAATGAAGTCAATGCACACAAAGGCCACACTGCACAATACACGAAATAA 2406 0.4302 MGMGIPSDDSILYYCGLRYLFCTFGSFCRWKGLKTFRYNIEMMSFAMGVGGSGGDQEPDNSGKGKKVYHRHTPYQTSQLEAFFKECPHPDENQRRQLGMELGLEPKQIKFWFQNKRTQTKTQNARADNAMLRAENERMQCENVAFREALKNLACPSCGGQPYGEEELEHHLQKLQQENDELKQEYERVSNLLAKCIGRPISELESVAPALGTSLDLSPRNSLNQEIGSPNADVDFTSALTVSVDDIFPTLMGEVTDVEKDLMLEAATSAMDELCRLMHINEPLWVKTAADGQFVLHCESYEKIYPRPNHFKSSGARGEATKDSRIVCMNGMQLVDMLLDSDKWVNLFPTIVRKAQTIEVLDVGSSENRSGALQLMYEEMHILSPLVPPREFCFIRYCQQVEAGVWVIVDVSFDSLRDSIPISHTWKFPSGCMIHEMPNQFSKVTWVEHVEVDDKNQTHRLYRDLVWGNFAYGAERWVVTLQRMCERFVYALDENIPSEEAQGVVTLGDGRRSIMNLAHRMVKDFCGILNMSGKDFPHLSESSNSGVRVSVRKNTNPGQPDGMVVSAATSLWLPLPQQTVFDFFKDEKRRIQWDILSSGNPEHEIAHISNGTHPGNCISLIRPFIPADNNVLILQETCTDPSGSLVVYAPVDVPLINMAARGEDTSLVPILPSGFVISGDGRPNPSPVARASSSSNVGGSGGTLLTVAFQILVCSSAAMRQLNIETVATINTLISSTVQKIKDALNCADVLKSGRWGVGTHLVKDEFIDEVTEYFPLGKKVIQPDSENEVNAHKGHTAQYTK 801
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dere10g0204 801 CDD START_ArGLABRA2_like 259 485 - -
Dere10g0204 801 PANTHER HOMEOBOX-LEUCINE ZIPPER PROTEIN MERISTEM L1 64 745 IPR042160 -
Dere10g0204 801 SMART HOX_1 64 126 IPR001356 GO:0003677
Dere10g0204 801 Pfam Homeodomain 66 120 IPR001356 GO:0003677
Dere10g0204 801 CDD bZIP 164 193 - -
Dere10g0204 801 MobiDBLite consensus disorder prediction 537 559 - -
Dere10g0204 801 SUPERFAMILY Homeodomain-like 49 123 IPR009057 -
Dere10g0204 801 FunFam Homeobox-leucine zipper protein HDG1 52 138 - -
Dere10g0204 801 Gene3D - 264 457 IPR023393 -
Dere10g0204 801 ProSiteProfiles START domain profile. 255 489 IPR002913 GO:0008289
Dere10g0204 801 SUPERFAMILY Bet v1-like 256 487 - -
Dere10g0204 801 Coils Coil 116 141 - -
Dere10g0204 801 MobiDBLite consensus disorder prediction 50 69 - -
Dere10g0204 801 SUPERFAMILY Bet v1-like 515 741 - -
Dere10g0204 801 ProSiteProfiles 'Homeobox' domain profile. 62 122 IPR001356 GO:0003677
Dere10g0204 801 SMART START_1 264 486 IPR002913 GO:0008289
Dere10g0204 801 Gene3D - 52 139 - -
Dere10g0204 801 Pfam START domain 266 486 IPR002913 GO:0008289
Dere10g0204 801 CDD homeodomain 65 123 IPR001356 GO:0003677
Dere10g0204 801 Coils Coil 164 198 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dere10g0204 Dere-ChrDere10 4205338 4210553 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dere10g0204 63 745 Homeobox Transcription Factor Family AT1G73360 47.421 0.0 624
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF HB-HD-ZIP Dere10g0204 START 1.7e-34 CL0209