Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dere10g0202 ATGTACTCCTTTTCATTTCCAAATTTGAAATTTCCGATTTCTGTTTCAAGTATAAGTGCAGGAGGCAAATCAGAAATGTATGAGAATACGGCATCGTTTGATCCTAACGCAATGGCTGATGGCAGAGTCTGGCTAAAAGATAGTTTTCTCGACGCACCGATGCCGCAGCCGCCGTTGCTCATGGCTGACGGCATTCTTGCAAGCAGCAATAATGGCGTGGAAGAAAATCTCAAGCTCTCTGTGGAGGAGCTCTCTTATCACCAGCACCACAATCATCCACCGCCGCACCCGGAAGACATCTCCACCTTCGCTAACGGCGTCGCTGCCGCCGCATCAGTGGACATCACGCAATCTCAACATCTTGGTTTGAGCGTAGTAAACACCTACAACAATGATAATTTGGTTCAAGAAGTTATTGATGCCCTCGCCTGTAAACAATCCTCTTGGGACCCTAACGTTCAGGAATTGCAGCATTTGGATTATTCTAATTACCACCATGAACAACAGCAGCAACCCCAACAATTTCAGCAAACTGAGACTCAAAGCTACAATTATTCCATACTCGACCCTTCTTCAAATCTGATCGACCTCCTCCATTACAACCCAACCCAGAAGATACCCAATTTCCAAAACTCCATGGGGTTCCTCGGAGAAATTCCAATAGGATCTGATAGCACAAGAGCGTGCTCGGTGTTGTACGATCCTCTGTTTCATTTGAATCTGCCTCCACAGCCCCCGGCACTAAGAGAGCTATTTCAGTCTCTTCCTCGTGGCTATAGCTTGCCCACTAGTTCCAGAAATGGTTCTGTCTTTGGTGGAGGCGATGAGATAGAGGGGTGTGGGATTGAGTGTCAGGATGGAGATGGGAGCCAGCTTGACAATGGAGTACTAGAATTCAACAGAGGGACAACTCGTGGTGGCAAAGGAAGAGAAGGAAAAGGCACCCATCATTTTGCTACTGAGAAACAAAGAAGAGAGCAATTGAATGACAAATTCACCGTCCTGAGGAGTCTGATCCCAAACCCCACCAAGGTGGATAGAGCATCTGTGGTGGGAGATGCCATTGAGTATATAAAAGAGCTGATCAGAACAGTGAATGAGCTGAAATTGTTGGTGGAGAAGAAAAGATTTGGAATGCACAGGTGCAAGAGGCACAAAGCAAAAGACGATGCTGGAGAGAGCTGTAACATGAAGCCCTGTGGTGACCCAGATGGATGCGTAAGGACGTCATGGCTACAGAGAAAATCCAAAGACACTGAGGTTGATGTTCGGATCATCGACGATGAAGTCACAATCAAACTCGTTCAGAGGAAGAAGATCAGCTGCTTGCTGTTTGTCTCCAAGGTTCTGGATGAACTTCAGCTGGATCTTCACCATGTTGCAGGAGGGCATGTTGGTGAATATTGCAGTTTTTTGTTCAATAGCAAGATATATGAAGGTTCTTCAGTATATGCAAGTGCCATAGCCAACAAGGCGATTGAGGTTTTGGACAGGCAGTATGCTGCAGCTGTTCCACATGCTAATAGTAGGCTGTAG 1536 0.4635 MYSFSFPNLKFPISVSSISAGGKSEMYENTASFDPNAMADGRVWLKDSFLDAPMPQPPLLMADGILASSNNGVEENLKLSVEELSYHQHHNHPPPHPEDISTFANGVAAAASVDITQSQHLGLSVVNTYNNDNLVQEVIDALACKQSSWDPNVQELQHLDYSNYHHEQQQQPQQFQQTETQSYNYSILDPSSNLIDLLHYNPTQKIPNFQNSMGFLGEIPIGSDSTRACSVLYDPLFHLNLPPQPPALRELFQSLPRGYSLPTSSRNGSVFGGGDEIEGCGIECQDGDGSQLDNGVLEFNRGTTRGGKGREGKGTHHFATEKQRREQLNDKFTVLRSLIPNPTKVDRASVVGDAIEYIKELIRTVNELKLLVEKKRFGMHRCKRHKAKDDAGESCNMKPCGDPDGCVRTSWLQRKSKDTEVDVRIIDDEVTIKLVQRKKISCLLFVSKVLDELQLDLHHVAGGHVGEYCSFLFNSKIYEGSSVYASAIANKAIEVLDRQYAAAVPHANSRL 511
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dere10g0202 511 Pfam Helix-loop-helix DNA-binding domain 315 361 IPR011598 GO:0046983
Dere10g0202 511 SUPERFAMILY HLH, helix-loop-helix DNA-binding domain 313 381 IPR036638 GO:0046983
Dere10g0202 511 SMART finulus 318 367 IPR011598 GO:0046983
Dere10g0202 511 CDD bHLH_AtMYC1_like 317 378 IPR045896 -
Dere10g0202 511 ProSiteProfiles Myc-type, basic helix-loop-helix (bHLH) domain profile. 312 361 IPR011598 GO:0046983
Dere10g0202 511 PANTHER TRANSCRIPTION FACTOR BHLH91 24 503 IPR045895 GO:0006355|GO:0048658
Dere10g0202 511 Gene3D - 308 376 IPR036638 GO:0046983
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dere10g0202 Dere-ChrDere10 4187762 4190066 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dere10g0202 26 508 Basic Helix-Loop-Helix Transcription Factor Gene Family AT2G31210 38.327 3.06e-90 281
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bHLH Dere10g0202 HLH 3.7e-12 No_clan