Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dere10g0201 ATGTATGAGAATACGGCATCTTTTGATCCTAACGCAATGGCGGATGGGACAATCGCGCTAAAAGACAGCTTTACCGACGCACCGACGCCGCAGCCGCCGTCGCTCATGGCTACCGGCAACATCGCAAGCAGCAACAATGGCTTGGATGAAAATCTCAAGCTCTCTGTGGAGGAGCTCTCTTATCACCATCACCAGCACTACCATCATCATCCACCGCGGCACCCGGAAGACATCTCCACCTTCGCTAACGGCGTCGCCATCGCTGCATCAGTGGACATTACACAACCTCAACATCTTGGTTTGAACGTGGGAAACTCCTACAACAATGAGAATTTGGTTCAAGAAGTGATAGATGCCCTCTCCCATAAGCAACCCACATGGGATCCTAACGTTCAGGAATTGCAGGATTTGGGATATTCTAATAATCACCATGAACAACAGCAGCAGCCCCAACAATTTCAGCAACTTGAGACTCAGAGCTACAATTCTTCTTCCATACTCGACCCTCCACCGCCTTACCCTTCTTCAAATCTCCTCGAACTCCTCCATTACAACCCAACCCAGAAAATACCCAATTTCCAAAATTCCATGGGGTTCCTCGGAGAAATTCCAATAGGATCAGACAGCACAAGCGCGTGCTCGGTGTTGTACGATCCTCTGTTTCATTTAAATCTGCCTCCACAGCCCCCGGCACTAAGAGAGCTATTTCAGTCTCTTCCTCGTGGCTATAGCTTGCCCACTAGTTCCAGAAATGGTTCTGTCTTTGGTGGAGGCGATGAGATAGAGGGGAGTGGGATTGTGTGTCAGGATGGAGATGGGAGCCAGCTTGATAATGGAGTACTAGAATTCAACAGAGGGACAACTCGTGGTGGCAAAGGAAGAGAAGGAAAAGGCACCAAGCATTTTGCTACTGAGAAACAAAGAAGAGAGCAATTGAATGACAAATTCACCGTCCTGAGGAGTCTGATCCCAAACCCCACCAAGGCGGATAGAGCATCTGTTGTGGGAGATGCCATTGAGTATATAAGAGAGCTGATCAGAACAGTAAACGAGCTGAAATTGTTGGTGGAGAAGAAAAGATTTGGAATGGACAGGTACAAGAAGCACAAAGCAGAAGATGATGCTGGAGAAAGCTGCAACATGAAGCCCTATGGCGACCCAGATGGATTGTTAAGGACATCATGGCTGCAGAGGAAATCCAAAGACACTGAGGTTGATGTCCGGATCATCGACGATGAAGTCACAATCAAACTCGTTCAGAGGAAGAAGATCAGCTGCTTGTTGTTTGTCTCCAAGGTTCTGGATGAACTTCAGCTGGATCTTCACCATGTTGCAGGTGGGCATGTTGGTGAATATTGCAGTTTCTTGTTCAATAGCAAGATATATGAAGGTTCTTCAGTATATGCAAGTGCCATAGCCAACAAGGTGATTGAGGTTTTGGACAAGCAGTATGCAGCAGCTGTTCCACACACCAACATCCAAGGGGTGCCCTTCTTCCTCTCCATATCACTATACACTTCTTCCTCTTCGGGAACACCGGAATCTGAACCTGACCTGCATCAATCTCCGTCACATCGCGAACCACTCCTGGACCTGCTTCAGCAACGCACCGGGGACCTTCTCCGCGATCCTCTCCCACCAATCCGACCAGTCCTCTGGGAACATCAACATAGCCCACTAAAACAGCTTGTCTTGCTCGCGAGTCCACTGCGCCATCGACTGGAACTAGAACTGCCACAATGCGTCAACGGTATGGGTGGAGATGACGCCGGAAGGACATAA 1782 0.4871 MYENTASFDPNAMADGTIALKDSFTDAPTPQPPSLMATGNIASSNNGLDENLKLSVEELSYHHHQHYHHHPPRHPEDISTFANGVAIAASVDITQPQHLGLNVGNSYNNENLVQEVIDALSHKQPTWDPNVQELQDLGYSNNHHEQQQQPQQFQQLETQSYNSSSILDPPPPYPSSNLLELLHYNPTQKIPNFQNSMGFLGEIPIGSDSTSACSVLYDPLFHLNLPPQPPALRELFQSLPRGYSLPTSSRNGSVFGGGDEIEGSGIVCQDGDGSQLDNGVLEFNRGTTRGGKGREGKGTKHFATEKQRREQLNDKFTVLRSLIPNPTKADRASVVGDAIEYIRELIRTVNELKLLVEKKRFGMDRYKKHKAEDDAGESCNMKPYGDPDGLLRTSWLQRKSKDTEVDVRIIDDEVTIKLVQRKKISCLLFVSKVLDELQLDLHHVAGGHVGEYCSFLFNSKIYEGSSVYASAIANKVIEVLDKQYAAAVPHTNIQGVPFFLSISLYTSSSSGTPESEPDLHQSPSHREPLLDLLQQRTGDLLRDPLPPIRPVLWEHQHSPLKQLVLLASPLRHRLELELPQCVNGMGGDDAGRT 593
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dere10g0201 593 MobiDBLite consensus disorder prediction 283 307 - -
Dere10g0201 593 MobiDBLite consensus disorder prediction 143 170 - -
Dere10g0201 593 PANTHER TRANSCRIPTION FACTOR BHLH91 3 487 IPR045895 GO:0006355|GO:0048658
Dere10g0201 593 MobiDBLite consensus disorder prediction 143 166 - -
Dere10g0201 593 CDD bHLH_AtMYC1_like 301 362 IPR045896 -
Dere10g0201 593 MobiDBLite consensus disorder prediction 288 307 - -
Dere10g0201 593 SMART finulus 302 351 IPR011598 GO:0046983
Dere10g0201 593 ProSiteProfiles Myc-type, basic helix-loop-helix (bHLH) domain profile. 296 345 IPR011598 GO:0046983
Dere10g0201 593 Pfam Helix-loop-helix DNA-binding domain 299 345 IPR011598 GO:0046983
Dere10g0201 593 Gene3D - 294 368 IPR036638 GO:0046983
Dere10g0201 593 SUPERFAMILY HLH, helix-loop-helix DNA-binding domain 294 361 IPR036638 GO:0046983
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dere10g0201 Dere-ChrDere10 4179170 4183046 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dere10g0201 1 492 Basic Helix-Loop-Helix Transcription Factor Gene Family AT2G31210 36.882 1.35e-90 284
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bHLH Dere10g0201 HLH 1.2e-11 No_clan