Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dere10g0174 ATGGCGCCGAGTAGCAAAAGCCTACAGCTGACTTCCCTCGCCTCCGCCGCCGCCGCCGATGATGGTGCCGATGACATGGAGGATGTGCGGCTTTTGGACTCCTACGAAGAAAGAAACTACAATGGTTCCGATGGAATTGAAGAAGGGTTGAGGCGAATTCATGTCAGAATCACCGGCATGACCTGCGCTGCGTGCTCCAATTCCGTCGAAGGAGCTCTGAAGGCCGTCGATGGCGTCATTAGCGCCTCCGTGGCTCTGCTTCAGAACAAGGCTGACGTGGTTTACAATCCGTCTCTGGTTAAGGATGTAGATATTAAAAATGCAATTGAAGATGCAGGGTTTGAAGCAGACATATTACCTGAACCCAGTCTCAGTGCACTTGGAAAAAAGCCGCATGGAACCCTTGTGGGACAGTTCACAATTGGTGGTATGACATGTGCAGCCTGTGTAAATTCTGTTGAAGGTATTTTAAGAGATCTTCCCGGGGTCAAAAGGGCCGTGGTAGCTTTGGCTACTTCCTTAGGAGAAGTTGAATATGATCCTAATGTAATTAACAAAGATGATATAGTCAATGCAATTGAAGATGCTGGTTTTGAAGGTTCATTTGTACAGAGCAGTGAGCAGGATAAAATAAATTTATGGGTTGTTGGTGTATACAGCTTGATTGATGCACAAGTCTTAGAAGGCATGCTCAGCAACATGAAAGGAGTAAGGCAGTTTCGTTTTGACCAGATATCAAACGGATTGGAAGTTCTTTTTGATCCTGAAGTTTTGAGCTCTAGATCCTTAGTTGACGAGATTGAAGGGAGAAGTAATGGCCAGTTTAAATTACATGTTAGAAGCCCTTATACTAGAATGGCTTCTAAAGATGTTGAAGAAGCCTCAACTATGTTTCGGCTATTTATCTCCAGCCTGTCTCTTAGTATTCCTCTCTTCTTTATGCGAGTAGTTTGTCCTCATATACCAATGATATATTCATTATTACTTTGGAGATGTGGGCCTTTCCTTATGGGTGATTGGTTGAAGTGGGCATTGGTGAGTCTAATTCAATTTGTAATTGGGAAGCGCTTCTACATTGCAGCTGGCAGAGCTATTCGAAATGGTTCAACTAACATGGATGTCTTGGTTGCATTGGGAACTACAGCATCTTATGTCTATTCTGTTTGTGCTCTACTGTATGGTGCTCTAACTGGATTTTGGTCTCCAACATATTTTGAGACAAGTGCCATGCTCATAACATTTGTATTGTTGGGCAAGTACTTGGAATGCCTTGCCAAGGGAAAGACATCGGATGCCATCAAGAAATTAGTAGAACTTGCTCCTGCAACGGCTTTATTGGTTGTCAAAGATAAAGGTGGGAGATCTATTGAAGACAGGGAAATAGATTCTTTGCTCATTCAACCTGGTGACACTTTAAAAGTTCCCCCTGGTACAAAGGTTCCTGCTGATGGCATCGTTGTATGGGGCTCAAGTTACATAAATGAGAGCATGGTAACTGGTGAATCTGTACCTGTTTTAAAGGAGGTGAATGCAACTGTTATTGGAGGTACAATAAATTTACATGGCGTCCTTCTCATTCAAGCTACCAAAGTTGGATCGGATACAGTTTTGAGTCAGATAATTAGCTTGGTTGAGACTGCCCAGATGTCCAAGGCTCCCATTCAGAAATTTGCTGATTATGTAGCAAGCGTATTTGTTCCCACAGTTGTTGCTTTGGCACTATTGACATTATTGAGTTGGTATGTTGCTGGGGTTCTTGGAGCTTACCCTGAAGAATGGTTGCCAGAAAATGGAAATCATTTTGTTTTTGCCCTTATGTTTTCAATATCTGTAGTGGTGATTGCGTGTCCCTGTGCACTTGGCTTGGCAACACCAACAGCTGTCATGGTAGCAACAGGGGTTGGGGCCAACAATGGAGTGTTGATTAAAGGAGGTGATGCCTTGGAAAGGGCTCAGATGGTCAAGTATGTGATTTTTGATAAGACAGGTACTTTAACTCAGGGAAAAGCTACCTTCGCTGCTGCCAAGGTATTCACAGGAATGGATCGTGGGGAGTTTCTAAAATTGGTTGCGTCTGCTGAGGCTAGCAGTGAACACCCACTGGCGAAAGCAATAGTAGCATATGCACGTCATTTTCATTTCTTTGATGAATCCTCTGCAACTACTGGTATCAAAGATGATACCAATGAGTTAAAGTCTGGGTGGCTTTTTAATGTCTCAGACTTCTTGGCTCTTCCAGGAAGAGGCGTTCAATGTTTCATAGATGGGAAGCGTATTTTGGTTGGTAATAGGAAATTAATGGTGGAAAATGGCATAGATATTCCGACTGAAGTGGAAAATTTTGTGGTAGAGCTAGAAGAAAGTGCAAAAACAGGGATTCTGGTCACATATGATGATCAGTTAACTGGAGTTATAGGGGTTGCAGACCCACTAAAGAGAGAGGCTTCTGTGGTTATTGAGGGCCTCAAGAAAATGGGTGTTAGACCCGTTATGGTTACAGGAGATAACTGGAGAACAGCACGAGCTGTTGCCAAGGAGGTTGGCATTGAAGATGTAAGGGCAGAGGTTCTGCCTGCAGGAAAGGCTGATGTTGTTCGTTCATTACAGAAAGACGGAAGTATAGTTGCAATGGTGGGTGATGGTATCAATGATTCTCCTGCATTAGCTGCTGCAGATGTCGGCATTGCAATTGGGGCGGGGACTGATATTGCAATAGAAGCTGCTGACTATGTGTTGATGAGAAACAATCTGGAAGATGTAATCACAGCCATTGATCTCTCGAGGAAGACCTTTTCTCGTATTAAGTTGAATTATGTTTTCGCAATGGCCTACAATGTGGTTGCTATACCAGTTGCTGCTGGGGTTCTCTATCCTTCACTAGGGATCAAGCTTCCACCATGGGTCGCCGGTACTTGCATGGCTCTCTCATCTGTAAGTGTTGTATGCTCTTCTTTGCTTCTCAGGAGATATAGAAGACCTAGACTTACTGAAATACTTGAAATAATTGTAGATTAG 3015 0.4342 MAPSSKSLQLTSLASAAAADDGADDMEDVRLLDSYEERNYNGSDGIEEGLRRIHVRITGMTCAACSNSVEGALKAVDGVISASVALLQNKADVVYNPSLVKDVDIKNAIEDAGFEADILPEPSLSALGKKPHGTLVGQFTIGGMTCAACVNSVEGILRDLPGVKRAVVALATSLGEVEYDPNVINKDDIVNAIEDAGFEGSFVQSSEQDKINLWVVGVYSLIDAQVLEGMLSNMKGVRQFRFDQISNGLEVLFDPEVLSSRSLVDEIEGRSNGQFKLHVRSPYTRMASKDVEEASTMFRLFISSLSLSIPLFFMRVVCPHIPMIYSLLLWRCGPFLMGDWLKWALVSLIQFVIGKRFYIAAGRAIRNGSTNMDVLVALGTTASYVYSVCALLYGALTGFWSPTYFETSAMLITFVLLGKYLECLAKGKTSDAIKKLVELAPATALLVVKDKGGRSIEDREIDSLLIQPGDTLKVPPGTKVPADGIVVWGSSYINESMVTGESVPVLKEVNATVIGGTINLHGVLLIQATKVGSDTVLSQIISLVETAQMSKAPIQKFADYVASVFVPTVVALALLTLLSWYVAGVLGAYPEEWLPENGNHFVFALMFSISVVVIACPCALGLATPTAVMVATGVGANNGVLIKGGDALERAQMVKYVIFDKTGTLTQGKATFAAAKVFTGMDRGEFLKLVASAEASSEHPLAKAIVAYARHFHFFDESSATTGIKDDTNELKSGWLFNVSDFLALPGRGVQCFIDGKRILVGNRKLMVENGIDIPTEVENFVVELEESAKTGILVTYDDQLTGVIGVADPLKREASVVIEGLKKMGVRPVMVTGDNWRTARAVAKEVGIEDVRAEVLPAGKADVVRSLQKDGSIVAMVGDGINDSPALAAADVGIAIGAGTDIAIEAADYVLMRNNLEDVITAIDLSRKTFSRIKLNYVFAMAYNVVAIPVAAGVLYPSLGIKLPPWVAGTCMALSSVSVVCSSLLLRRYRRPRLTEILEIIVD 1004
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dere10g0174 1004 ProSiteProfiles Heavy-metal-associated domain profile. 51 117 IPR006121 GO:0046872
Dere10g0174 1004 FunFam Probable copper-transporting ATPase HMA5 767 935 - -
Dere10g0174 1004 PRINTS Copper-transporting ATPase 1 signature 52 77 - -
Dere10g0174 1004 PRINTS Copper-transporting ATPase 1 signature 107 127 - -
Dere10g0174 1004 PRINTS Copper-transporting ATPase 1 signature 78 101 - -
Dere10g0174 1004 FunFam Copper-exporting P-type ATPase 758 809 - -
Dere10g0174 1004 CDD P-type_ATPase_Cu-like 299 974 - -
Dere10g0174 1004 CDD HMA 55 116 IPR006121 GO:0046872
Dere10g0174 1004 Gene3D - 50 121 - -
Dere10g0174 1004 FunFam Copper-transporting ATPase RAN1 665 757 - -
Dere10g0174 1004 ProSiteProfiles Heavy-metal-associated domain profile. 135 201 IPR006121 GO:0046872
Dere10g0174 1004 Gene3D - 665 756 IPR023299 GO:0000166
Dere10g0174 1004 Gene3D - 757 809 IPR023299 GO:0000166
Dere10g0174 1004 SUPERFAMILY HMA, heavy metal-associated domain 134 206 IPR036163 GO:0046872
Dere10g0174 1004 Pfam haloacid dehalogenase-like hydrolase 654 892 - -
Dere10g0174 1004 SUPERFAMILY Calcium ATPase, transmembrane domain M 392 954 IPR023298 -
Dere10g0174 1004 Pfam Heavy-metal-associated domain 139 199 IPR006121 GO:0046872
Dere10g0174 1004 Pfam Heavy-metal-associated domain 55 115 IPR006121 GO:0046872
Dere10g0174 1004 Pfam E1-E2 ATPase 441 637 - -
Dere10g0174 1004 NCBIfam heavy metal translocating P-type ATPase 372 987 IPR027256 GO:0006812|GO:0016020|GO:0019829
Dere10g0174 1004 NCBIfam HAD-IC family P-type ATPase 757 959 IPR001757 GO:0005215|GO:0005524|GO:0016020|GO:0016887
Dere10g0174 1004 NCBIfam HAD-IC family P-type ATPase 411 710 IPR001757 GO:0005215|GO:0005524|GO:0016020|GO:0016887
Dere10g0174 1004 PANTHER P-TYPE CATION-TRANSPORTING ATPASE 42 999 - -
Dere10g0174 1004 FunFam Copper-transporting ATPase 1, putative 426 548 - -
Dere10g0174 1004 FunFam Copper-exporting P-type ATPase A 50 119 - -
Dere10g0174 1004 SFLD p-type atpase 640 930 IPR044492 -
Dere10g0174 1004 SUPERFAMILY HMA, heavy metal-associated domain 48 121 IPR036163 GO:0046872
Dere10g0174 1004 SFLD C1.7: P-type atpase like 640 930 - -
Dere10g0174 1004 NCBIfam copper ion binding protein 138 199 IPR006122 GO:0005507
Dere10g0174 1004 NCBIfam copper ion binding protein 54 116 IPR006122 GO:0005507
Dere10g0174 1004 ProSitePatterns E1-E2 ATPases phosphorylation site. 660 666 IPR018303 -
Dere10g0174 1004 Gene3D - 625 935 IPR023214 -
Dere10g0174 1004 Gene3D - 426 548 - -
Dere10g0174 1004 CDD HMA 138 199 IPR006121 GO:0046872
Dere10g0174 1004 SUPERFAMILY Calcium ATPase, transduction domain A 459 544 IPR008250 -
Dere10g0174 1004 ProSitePatterns Heavy-metal-associated domain. 57 87 IPR017969 GO:0046872
Dere10g0174 1004 FunFam Copper-exporting P-type ATPase A 134 203 - -
Dere10g0174 1004 ProSitePatterns Heavy-metal-associated domain. 141 170 IPR017969 GO:0046872
Dere10g0174 1004 Gene3D - 137 202 - -
Dere10g0174 1004 PRINTS P-type cation-transporting ATPase superfamily signature 878 897 - -
Dere10g0174 1004 PRINTS P-type cation-transporting ATPase superfamily signature 803 814 - -
Dere10g0174 1004 PRINTS P-type cation-transporting ATPase superfamily signature 825 835 - -
Dere10g0174 1004 PRINTS P-type cation-transporting ATPase superfamily signature 901 913 - -
Dere10g0174 1004 PRINTS P-type cation-transporting ATPase superfamily signature 494 508 - -
Dere10g0174 1004 PRINTS P-type cation-transporting ATPase superfamily signature 658 672 - -
Dere10g0174 1004 SUPERFAMILY HAD-like 657 984 IPR036412 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dere10g0174 Dere-ChrDere10 3943366 3951286 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dere10g0174 1 1004 Primary Pumps ATPases AT5G44790 74.951 0.0 1513