Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dere10g0170 ATGGAGGGTCATCAACAACCTTTGGATTTCCTCAATTTATTCTCCAAATCCAAACCACCAAATGAAGAGAATTATATGACCTATAAGGGTCAGAAGAATTCATCTTCATCATCCGCAAATACTGTAGTTTCTACTGAATTATCTCTTTCTTCTATCTTCTCCTCATCTTCCTCCTCCTCCAATGCCCATAGCCGTCAATACTTTGGTGGTTCCAAGAGAAACAATACCAGGAGGAGAAAATCATCAAAGCCGCATAATTACAAGACTCCTTCTTCTTCCATTACAGAGAAAGAAAAAACAAGGAGCTTCAATGATACTAATAATAATAATAACAATAGCCAGTGCTGCTGGGGCTACTCTACAACTTCGAAGCTGTACGAGGACCCATGGAAGATCAAGAAGGTTCTAACAGCGAGTGATATAGGGAAGCTGAATAGGCTTCTGTTGAGTTCAGATTTGATGGAGAATCTGGTAGTTCCTGTGCTGGGAGACTGCAAAAATGATGAAGATCAGGAATTACTGAGTACAGAGGGAAAGGCAATTAGGGTGTGGGATGTGGAAACCATGACCATGCACGAGCTGATTCTGAAGCGATGGGCTTCCTTCAAGAACTACGTTCTGATTGGAGATTGGACCCAGGACTTCGTCAAGAGGAGGGCTCTCAAGAAAGGAGATGAGATTGGCCTCCAATGGGATTCCTTCAACCACAGCTTCAACTTCTCCGTTCTCAACCGAGTTATGCAGTGA 747 0.4284 MEGHQQPLDFLNLFSKSKPPNEENYMTYKGQKNSSSSSANTVVSTELSLSSIFSSSSSSSNAHSRQYFGGSKRNNTRRRKSSKPHNYKTPSSSITEKEKTRSFNDTNNNNNNSQCCWGYSTTSKLYEDPWKIKKVLTASDIGKLNRLLLSSDLMENLVVPVLGDCKNDEDQELLSTEGKAIRVWDVETMTMHELILKRWASFKNYVLIGDWTQDFVKRRALKKGDEIGLQWDSFNHSFNFSVLNRVMQ 248
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dere10g0170 248 Gene3D - 128 244 IPR015300 -
Dere10g0170 248 CDD B3_DNA 130 244 IPR003340 GO:0003677
Dere10g0170 248 PANTHER TRANSCRIPTION FACTOR B3-DOMAIN FAMILY-RELATED 91 245 - -
Dere10g0170 248 MobiDBLite consensus disorder prediction 53 71 - -
Dere10g0170 248 MobiDBLite consensus disorder prediction 1 41 - -
Dere10g0170 248 MobiDBLite consensus disorder prediction 17 41 - -
Dere10g0170 248 MobiDBLite consensus disorder prediction 53 107 - -
Dere10g0170 248 SUPERFAMILY DNA-binding pseudobarrel domain 129 238 IPR015300 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dere10g0170 Dere-ChrDere10 3882067 3882813 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dere10g0170 134 235 RAV Transcription Factor Family AT3G61970 33.010 4.16e-06 45.1