Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dere10g0067 ATGGAGAGGGTCTTAGTTGAGGGACTGTTTATTATACTGAATCTAGTGATAATCTCAGTGGTTGTGAGCGCGGGGGAAGCTCAGCCAGAGTCGTTTTTCATAAATTGTGGTTCAAATTCTTCTGTAAATGTGGATGGTAGGAGATGGGTTGGAGATACGGCCTCCAATAACAATATCACTCTTAGTTCTCCTGGTGTTGCTGCTTCCACTTCCACATTGAGTGGCAGTTCACACTACGATCCACTCTACAAAACCGCCCGGTTTTTCACAGGTGCTTATAATTACACAATTAAAGGAGTTCAGGGAAACTATATTGTTAGGCTCCATTTCTGTCCCTTTGTGTTTGAGAACTACAATCTAAATGAGTCCTCCTTTGGTGTTGTGGCCAATGGTCTGAAACTATTGTCCGAGTTCAATGTTCCGGGTGAGCTATCACCCAAGAATATGTACTTGCAGAATTCTGGAAGTAATTCGAGTTCATTCTTCTTGATTAAAGAGTATATTATGGCTATCAATACAGGTGTACTTGTGATTGAACTCATCCCAACAAGAAGCTTATTTGGCTTTATCAATGCCATTGAGATTGTTCCAGTTGTGGATGAGCTTTTTGCAGGCTCTGTCAATAAAGTTGGCGGAAGTGATGCAAATTTGAATTTGACTGGACGTGGGATGGAGACTATGTATAGGTTGAATGTTGGTGGTCCTGAAATTACATCCCATGAGGATACAGATTTTTGGAGAACTTGGGAAGTGGATTCTAGCTACATGATCACAGCAAATGCTGGATCAGAAATTAACAACAGTTCTAATATTACATATGCTTCAATGAATGATTCTTCAGTGGCTCCTCTCCTTGTTTACGAGGCTGCAAGGACAATGTCCAACACTCAAGTCTTGGATAAAAGATTTAACATGTCATGGAAGTTTGATGTGGACCCTGATTTTGAGTATTTGATCCGATTACATTTCTGTGAGCTGGAATTTGATAAGGCAAATGAGAGAATTTTCAGGATCTATATAAATAATAAGACAGCAGCAGATAATGTTGATATATTTGTACGAGCAGGAGGGAAGAACAAAGCATATCACCAGGATTATGTTGATGCGGTGTCCTCAAGAATCACCACACTTTGGGTTCAATTAGGTCCTGATACAGCTGCTGGCGCTGCGGGGACTGATGCTCTCTTAAATGGGCTTGAAATTTTCAAGATTAGTCGAAATGGGAATCTTGCCTACATAGAGAGATATGGTTCAGCAGGCAATTCTACTAGCAAATCAAAAACACGAATTCTTTGGGTGGGAATTGGAGCAGGTCTGGCTTCTGCTGCCATAATTACACTAATACTTGCTTTAGTTTTCTGGTTTTGCAAAAGATTCAGGAAACCATCAGGTGATACCAAAAACAACACTCCAGGTTGGCGGCCATTGTTTCTTTATGGGGCCACTGTGAACAGCACTGTCAGTGCCAAGGGATCAGCTGGAACCCAAAATCCATATGGATCTGTGGCATCAATCAGACTTGGCAAGCGGTTTACATTAGCAGAAATTCGTGCCGCAACAAAAAATTTTGATGAGAGTTTGGTAATTGGAGTAGGAGGCTTTGGTAAGGTGTACAAGGGAGAAATTGATGATGGTGTGCTTGCTGCAATTAAGCGGGCCAACCCGCAGTCAGAGCAAGGTCTGGCTGAATTTGAGACAGAGATTGAGATGCTTTCCAAACTCAGGCATAGGCATCTGGTGTCCCTGATTGGGTTCTGTGAAGAGCAAAATGAAATGATTTTGGTTTATGAGTATATGGCAAATGGGACTCTTAGAAGTCATCTGTTTGGTAGTGATCTTCCTCCATTAACTTGGAAGCAGCGCCTAGAAGTGTGTATTGGTGCTGCAAGAGGACTTCATTACTTGCATACAGGAGCAGATCGTGGAATAATTCACAGGGATGTCAAGACAACCAACATATTGTTAGATGATAAATTTGTAGCTAAAGTGTCTGATTTTGGATTGTCAAAAGATGGTCCAGCTTTGGATCATACCCATGTTAGTACAGCTGTGAAAGGAAGTTTTGGGTACCTAGACCCTGAGTACTTCAGACGGCAGCAGCTGACCGAGAAATCAGATGTTTACTCTTTTGGCGTCATGTTGTTTGAAGTTGTTTGTGCTCGAGCTGTGATAAACCCTACATTGCCTAAAGATCAAATCAATCTCGCTGAATGGGCATTGAGATGGCAGAGGCAGAGATCCCTCGAAACTATTATTGACCCATGTCTTGCAAGAAATTATTGCCCTGAGTCCTTGTCCAAGTATGGCGAGATAGCAGAAAAATGTCTTGCCGATGAAGGGAAGAATCGGCCCACAATGGGTGAGGTATTATGGCACTTGGAGTATGTTCTGCAACTACATGAAGCTTGGTTAAACGCTACCAGCAGAGAAACTTCATTCTCAAGCAGTCAAGCTTTAAGAGGATTGAGAGAGGGAGAACCAGAAGAGATACAGGAACCATCAGCTTGTCTAAATGAAGACAATGGCTCTGCCACAAGATTTGTCAAAGAAATGGATGCTGCAACTTGA 2568 0.421 MERVLVEGLFIILNLVIISVVVSAGEAQPESFFINCGSNSSVNVDGRRWVGDTASNNNITLSSPGVAASTSTLSGSSHYDPLYKTARFFTGAYNYTIKGVQGNYIVRLHFCPFVFENYNLNESSFGVVANGLKLLSEFNVPGELSPKNMYLQNSGSNSSSFFLIKEYIMAINTGVLVIELIPTRSLFGFINAIEIVPVVDELFAGSVNKVGGSDANLNLTGRGMETMYRLNVGGPEITSHEDTDFWRTWEVDSSYMITANAGSEINNSSNITYASMNDSSVAPLLVYEAARTMSNTQVLDKRFNMSWKFDVDPDFEYLIRLHFCELEFDKANERIFRIYINNKTAADNVDIFVRAGGKNKAYHQDYVDAVSSRITTLWVQLGPDTAAGAAGTDALLNGLEIFKISRNGNLAYIERYGSAGNSTSKSKTRILWVGIGAGLASAAIITLILALVFWFCKRFRKPSGDTKNNTPGWRPLFLYGATVNSTVSAKGSAGTQNPYGSVASIRLGKRFTLAEIRAATKNFDESLVIGVGGFGKVYKGEIDDGVLAAIKRANPQSEQGLAEFETEIEMLSKLRHRHLVSLIGFCEEQNEMILVYEYMANGTLRSHLFGSDLPPLTWKQRLEVCIGAARGLHYLHTGADRGIIHRDVKTTNILLDDKFVAKVSDFGLSKDGPALDHTHVSTAVKGSFGYLDPEYFRRQQLTEKSDVYSFGVMLFEVVCARAVINPTLPKDQINLAEWALRWQRQRSLETIIDPCLARNYCPESLSKYGEIAEKCLADEGKNRPTMGEVLWHLEYVLQLHEAWLNATSRETSFSSSQALRGLREGEPEEIQEPSACLNEDNGSATRFVKEMDAAT 855
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dere10g0067 855 Gene3D Phosphorylase Kinase; domain 1 488 598 - -
Dere10g0067 855 ProSitePatterns Serine/Threonine protein kinases active-site signature. 643 655 IPR008271 GO:0004672|GO:0006468
Dere10g0067 855 FunFam Receptor-like protein kinase FERONIA 223 406 - -
Dere10g0067 855 Pfam Malectin-like domain 34 404 IPR024788 -
Dere10g0067 855 MobiDBLite consensus disorder prediction 823 855 - -
Dere10g0067 855 ProSiteProfiles Protein kinase domain profile. 523 795 IPR000719 GO:0004672|GO:0005524|GO:0006468
Dere10g0067 855 Gene3D Transferase(Phosphotransferase) domain 1 599 817 - -
Dere10g0067 855 FunFam receptor-like protein kinase FERONIA 487 598 - -
Dere10g0067 855 PANTHER OS07G0166700 PROTEIN 509 800 IPR045272 GO:0004714|GO:0006468
Dere10g0067 855 SMART serkin_6 523 796 IPR000719 GO:0004672|GO:0005524|GO:0006468
Dere10g0067 855 SUPERFAMILY Protein kinase-like (PK-like) 499 795 IPR011009 -
Dere10g0067 855 CDD STKc_IRAK 529 794 - -
Dere10g0067 855 ProSitePatterns Protein kinases ATP-binding region signature. 529 551 IPR017441 GO:0005524
Dere10g0067 855 Pfam Protein tyrosine and serine/threonine kinase 528 790 IPR001245 GO:0004672|GO:0006468
Dere10g0067 855 Gene3D - 223 406 - -
Dere10g0067 855 Gene3D - 31 198 - -
Dere10g0067 855 FunFam Receptor-like protein kinase FERONIA 599 813 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dere10g0067 Dere-ChrDere10 812738 815305 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dere10g0067 15 841 Receptor kinase-like Gene Family AT1G30570 65.380 0.0 1125
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_CrRLK1L-1 Dere10g0067 Malectin_like 7.1e-37 CL0202