Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dere10g0052 ATGATGAAGGGCTCTTCTAGTTTACACAAAAGAAAGTCTTCTTTAAAATCCGATGTGAGTCCTCCTGCATCCAAGAAAACGAGATGCAATCCGGAAGAAACTTTGTTAGATAAGATGAAGCAGCAAGAAGAAGACTTTACTAGAGAAGAAAAATACGATGAGGATGACGATAACGATGACAATGATCATGACAGTGATGAAGGAGCAGGTGAAGATGCTGATGATCATCTGGATGAAGCAGAGTACTTGTTAGGTGATGAAGGTCCAACTGTCATAGAGGGGGAATTCGAAAAAGGTCTTCTGGCAAAAGATGCAGATGAAGATAACAAGTCTGCTCGACATTTCAGCCATGGATCTCACTTGGTCCAAGGAAAGCTAGACCATGGGATGGAAGATTATATTTTTGCTAAACACAAGGATATCAATGGCTATGACTTAGGACTATATGCAATTTTTGATGGTCATGCAGGCCGTGACGTTGCAAAATACTTGCGAAGCCATCTATTTGAAAGTATATTGAATGAGCCAGATTTCTGGGAAAATCCTGTGCGTGCTGTTAAGAGAGCATGTAAGGCTGTAGATGATGAGATCTTAGAAAACATAGCCGATTCGCGAGGGGGATCAACAGCTGTTGCAGCAATACTAATTAATGGAGTGAAGTTACTGGTAGCCAATGTTGGTGATTCTCGTGCAATATTATGCAGAAATGGTGTGGCGAAACAAATTACAATAGATCATGAGCCTGAGAGGGAGAAACATCTAGTTGAGAGCAGAGGTGGTTTTGTGTCTAAGATGCCTGGGAATGTTCCAAGAGTGGATGGCCAATTAGCAATGACCAGGGCATTTGGGGATGGAAGTCTGAAGGAACACATTACTGCAGAACCAGATGTGATGGTTCAAAACATTGATGAGGACACTGAGTTCATCATTTTGGCAAGTGATGGCCTTTGGAAGGTGATGACAAATCAAGAGGCTTGTGACTGCATCAAAAATATTGATGATGCTCTAAAAGCATCTAAAAAGTTGGTTAAAGAAGCCCTGTCTCAAGGAAGCTATGATGATATTTCATGCATTGTTGTAATGTTTTAA 1089 0.4096 MMKGSSSLHKRKSSLKSDVSPPASKKTRCNPEETLLDKMKQQEEDFTREEKYDEDDDNDDNDHDSDEGAGEDADDHLDEAEYLLGDEGPTVIEGEFEKGLLAKDADEDNKSARHFSHGSHLVQGKLDHGMEDYIFAKHKDINGYDLGLYAIFDGHAGRDVAKYLRSHLFESILNEPDFWENPVRAVKRACKAVDDEILENIADSRGGSTAVAAILINGVKLLVANVGDSRAILCRNGVAKQITIDHEPEREKHLVESRGGFVSKMPGNVPRVDGQLAMTRAFGDGSLKEHITAEPDVMVQNIDEDTEFIILASDGLWKVMTNQEACDCIKNIDDALKASKKLVKEALSQGSYDDISCIVVMF 362
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dere10g0052 362 FunFam Probable protein phosphatase 2C 39 108 362 - -
Dere10g0052 362 MobiDBLite consensus disorder prediction 30 47 - -
Dere10g0052 362 CDD PP2Cc 115 360 IPR001932 -
Dere10g0052 362 MobiDBLite consensus disorder prediction 1 73 - -
Dere10g0052 362 SMART PP2C_4 106 360 IPR001932 -
Dere10g0052 362 ProSiteProfiles PPM-type phosphatase domain profile. 116 362 IPR001932 -
Dere10g0052 362 SMART PP2C_SIG_2 127 362 IPR001932 -
Dere10g0052 362 MobiDBLite consensus disorder prediction 48 73 - -
Dere10g0052 362 SUPERFAMILY PP2C-like 112 362 IPR036457 -
Dere10g0052 362 Pfam Protein phosphatase 2C 129 355 IPR001932 -
Dere10g0052 362 PANTHER PROTEIN PHOSPHATASE 61 360 IPR015655 GO:0004722|GO:0006470
Dere10g0052 362 ProSitePatterns PPM-type phosphatase domain signature. 148 156 IPR000222 GO:0043169
Dere10g0052 362 Gene3D - 111 362 IPR036457 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dere10g0052 Dere-ChrDere10 590879 596594 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dere10g0052 109 362 PP2C-type Phosphatase Gene Family AT3G15260 58.824 6.39e-105 308