Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dere1000153g0003 ATGGAGCGTAATTCCCTGAACCGCTCAACTGAAACTCAATTTGGGGGTAGTTCGCTCGCATTTCAAAGATCGGATCCGATGGGGCGAGAAAGTCACAAAATGAAGGCATTAAGCCTGCTGAGAACCAGAATCTCTGACCCCAAATTTATATTCAAGCCTCTCCACGATTCTCCAGAAAGCAACTACAGCAAGCTGAAATTCATGATATCTAGTTCAATTACTGAGGCATGCAATAATTCTATTCTGCTTCTTGGCCCCCGTGGCTCTGGGAAATCAGCGGTTTTGGAGCTCACTATTGGAGATTTATTGGTGGAATATCAGGACATGATTTCTGTGATCAGGTTGAATGGGCTTTTACATAGTGATGACAACTGTGCATTAAAGGAAATAGCTAGGCAATTATGCATGGAGCATCAACTGCAATTCTCAAAAGCGGCATCATTTGATGACAACTCCCAATTCATGATAGCCATGCTAAAGGAGTGTGGATTAGCACATAAAACAGTTATTTTTGTTCTGGATGAGTTTGACCTGTTTGCTCAGGGTAAACAGAGATTACTTTATAGCTTACTAGATGCTATGCAGTCAGTAACATCACAGGCTGTTGTAATTGGCATTAGTTGCCGGCTGGACGCAGATCAGCTGTTGGAAAAAAGAGTACGATCTCGTTTTTCGCATAGAAAGTTGTTGTTCCTTCCACCTTCAATGGAAGACTCAAAGAGAATTTTGGAGCACATAATGTCATTACCAATAGATTCAAGCCTTCCACATGATTATGCAGTTGAGTTCAATAGAAAGATTCAAGATATTGTAGAAGATAGAAGATTCAAAGAAACCTTCAATAAATATTTGAATTTTGACTCCTCAGTCAAACATTTGCTGCGGTTTCTATTCTGTGCAGTCTCTTGTATGGATTTGCAGACTGGATTCATGACATACGAGAACTTTGAAACTGCATTTTCAAGTATCCAGAGGCAACCCAAATTGGAATGTTTAAAAAATTGCTCCATATTAGAACTTTACATCCTGGTTTGCATGAAGAGATTGGAAGTTAAAGAGCAGAACTTTATCAACTTCAATTCTGTAATGAAAGAGTATAAAAACATACACGATTCCTTCCAGACTTCTGATTATTATGCGAGAAATGTCTGTTTAAGGGCATTTGAACATCTTATAAACCGTGAATTGATATGTTTCACTGACAACAGAGGATACAGTTCGTCTGTTGAATTTCGCCCTGTAAAGCTTTTAATTACGTCTGCGGAACTACATCAAGGACTAAGAGCATATCATTCATGCCCTGCTATTCTTCAGAAGTTAATGGATCGCGAAGGCTAA 1338 0.3916 MERNSLNRSTETQFGGSSLAFQRSDPMGRESHKMKALSLLRTRISDPKFIFKPLHDSPESNYSKLKFMISSSITEACNNSILLLGPRGSGKSAVLELTIGDLLVEYQDMISVIRLNGLLHSDDNCALKEIARQLCMEHQLQFSKAASFDDNSQFMIAMLKECGLAHKTVIFVLDEFDLFAQGKQRLLYSLLDAMQSVTSQAVVIGISCRLDADQLLEKRVRSRFSHRKLLFLPPSMEDSKRILEHIMSLPIDSSLPHDYAVEFNRKIQDIVEDRRFKETFNKYLNFDSSVKHLLRFLFCAVSCMDLQTGFMTYENFETAFSSIQRQPKLECLKNCSILELYILVCMKRLEVKEQNFINFNSVMKEYKNIHDSFQTSDYYARNVCLRAFEHLINRELICFTDNRGYSSSVEFRPVKLLITSAELHQGLRAYHSCPAILQKLMDREG 445
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dere1000153g0003 445 Gene3D - 58 233 IPR027417 -
Dere1000153g0003 445 Pfam AAA ATPase domain 63 199 IPR041664 -
Dere1000153g0003 445 FunFam Origin of replication complex subunit 4 59 233 - -
Dere1000153g0003 445 Pfam Origin recognition complex (ORC) subunit 4 C-terminus 242 425 IPR032705 -
Dere1000153g0003 445 PANTHER ORIGIN RECOGNITION COMPLEX SUBUNIT 4 33 444 IPR016527 GO:0000808|GO:0003677|GO:0005634|GO:0006260
Dere1000153g0003 445 PIRSF ORC4 24 445 IPR016527 GO:0000808|GO:0003677|GO:0005634|GO:0006260
Dere1000153g0003 445 MobiDBLite consensus disorder prediction 1 30 - -
Dere1000153g0003 445 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 76 249 IPR027417 -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dere1000153g0003 27 442 Core DNA Replication Machinery Family AT2G01120 65.485 0.0 577