Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dere1000066g0015 ATGAACCTCTCTCGAACCACCCACAACAACACCAACCCTACCACCACCACCACCAACACTAACAACAATCAAGCTTGCGCTGCCTGTAAATACCAACGCAAGAAGTGTGCTCCTGACTGCATTCTCGCGCCTTATTTTCCTCACGATCGCCAACGCCAATTCCTCAACGCTCATAAGCTATTTGGGGTTCGAAATATTACTAAGATAATCGAACACCTCGACCCTCATGATAAAGACCAAGCCATGAGAACTATTATTTATCAATCTGATATGCGAGCCAATGATCCCGTTGGAGGTTGTTATAGGTATATACAAGAGCTTCAAGCCCAGATTGAATATCACCGGGCTGAACTCGAACTTGTCCTTCAACAGCTCGCTGTTTTTCGAGCACAGGTTCACCACCATCATCATCCTCACGAAGTTATGAATACAGATCATATGAATTTGTACAGCCAGCCTATTGCACCACCTCATTATCAATACCTTCAACAGTTGCCGCAACAAGAGCCGTATATGATAGTTCAGGAAAATCACAGTAATAGTCTTCCTTTGCAGGATGATGTTAATTCTTGGGCTGTGCAGGATTCCATGTCTTTGTCATCCTTGTCGTTGCAGAACAAGAATGGTGAAGATAGTGGCTATGTCGGTGATGAATTGTATAATGATCACAAGTCATCGTCGTCTATGCTTGATATTCCTTGCGATGAGAGGAATGAGATCGGGTTTTCGCCTGAAGAATTAGTGGAGCGCAGTGATGAAACGGCTTTATTTAAGATAGACAATGCTGTAGTAAAAGCAGAGGATGATTGCATTCAGCAAGTTCAAGATCATGATCTAAAAGGTGCAGCAACTTTGTTTACTCTCACAAATTGTACCAGCTGA 882 0.4308 MNLSRTTHNNTNPTTTTTNTNNNQACAACKYQRKKCAPDCILAPYFPHDRQRQFLNAHKLFGVRNITKIIEHLDPHDKDQAMRTIIYQSDMRANDPVGGCYRYIQELQAQIEYHRAELELVLQQLAVFRAQVHHHHHPHEVMNTDHMNLYSQPIAPPHYQYLQQLPQQEPYMIVQENHSNSLPLQDDVNSWAVQDSMSLSSLSLQNKNGEDSGYVGDELYNDHKSSSSMLDIPCDERNEIGFSPEELVERSDETALFKIDNAVVKAEDDCIQQVQDHDLKGAATLFTLTNCTS 293
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dere1000066g0015 293 ProSiteProfiles LOB domain profile. 24 125 IPR004883 -
Dere1000066g0015 293 Coils Coil 104 124 - -
Dere1000066g0015 293 Pfam Lateral organ boundaries (LOB) domain 25 120 IPR004883 -
Dere1000066g0015 293 PANTHER LOB DOMAIN-CONTAINING PROTEIN 4-RELATED 22 159 - -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dere1000066g0015 24 142 AS2 family AT3G13850 73.554 3.16e-59 188
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF LOB Dere1000066g0015 LOB 3.2e-36 No_clan