Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dere1000066g0003 ATGGATTCTTCTTTTCTCATGGGTAGTACAATTTCAGAGCCTCGTGATGATATGGAATTTGAATCTCACGAAGCTGCCTATGCATTTTATAAAGAATATGCTAAGTCTGTGGGTTTTGGCACTGCCAAGTTGAGCAGTCGACGGTCTAGAGCATCAAAGGAGTTTATTGATGCCAAGTTTTCATGTATAAGATATGGTAATAAACAGCAATCTGATGATGCAATCAATCCTCGCCCTTCCCCAAAAATTGGTTGTAAAGCAAGCATGCATGTGAAAAGAAGACAAGATGGCAAGTGGTATGTCTATAGCTTTGTTAAAGAGCATAATCACGAGCTTTTACCTGCTCAGGCTCATTTTTTTCGTAGTCATAGGAATACTGATCCACTTGGTAATGATGTCCGGATGCGAAGGCGGAAGAATTTAACTGCGGTTTCTAAATTATTTAGTGCATATCAAAATGTTGATTGTTTAGAGAACTTTTTGAGAAATCAACATGATAAGGGACGGAACTTGGTTTTAGAAACAGGACATGCTCAATTGCTTCTTGAACTTTTTATGCACATGCAGGAAGAAAATCCTAAATTCTTCTATGCTGTTGATTTGAATGAAGAGCATCGACTGAGAAATGTGTTCTGGGTTGATGCTAAAGGCATGGAAGATTATACTTACTTTGGTGATGTTGTTTCTCTCGACACAACATATTTCACAAGCAAGTATAAGATACCATTGGTACTTTTTATTGGAGTAAACCATCATATTCAGCCAACATTGCTTGGTTGTGCATTGGTTGCTGATGAGACCATTTACACTCTTGCTTGGTTACTGCAAACGTGGTTAATAGCAATGGGGGGACGAGCTCCCCATGTGATTCTCACTGACCAAAACGAGGCCATGAAAGCAGCTGTTGCAGCGGTTCTTCCAGGCACACGTCATTGTTTTTGTCTGTGGCATATTTTGGAAAAGGTATCGAGGCAGCTTGAATTTTTAAGTGCATGGCATGATAGTTTCATGGAAAAATTCAACAAATGTATATATAAATCATGGACAGAGGAACAATTTGAAAAGAGATGGTGGAAGTTGGTTGACAAGTTTAATCTGAGAGATGTAGAATGGGTTCAATCCTTATATGAAGATCGGACACGATGGGTGCCAACTTTTATGAGAGAGATTTCTTTTGTTGGATTGTCCACTGGTTCTCGCACAGAAAGTTTAAATGCTTTGTTTGACAACTATATCCAAGGTGATACTTCATTGAGAGAATTTATAGAACGGTACAAAGTAATTCTTGAAGAGAGGTACGAAGAAGAAGCCAAAGCAAATTTTGATGCCTGGCACGAAACACCTGAACTGAAATCTCCTTCCCCTTTTGAGAAACAAATGTTATTTGTTTACACACATGAAATTTTTAAAAAGTTTCAAGTCGAAGTTCTCGGTGCAGCTGCTTGCCATCTGAAGAAAGAAAATGATGATGTGACTACAACATATACTGTGAAGGACTTTGAAGATAATCAAAGTTATGTGGTAGAATGGAACAAATCAAACTCAGATATATGTTGTTCATGCCGCTCATTTGAATATAAAGGTTATCTCTGTAGGCATGCTATTGTTGTTCTACAAATGTCTGGTGTTTTCAGTGTCCCACCCAAGTACGTATTGCAACGATTGACAAATGCTGCTATGAGCAAGCATCCTATAAGTGAAAGATTAGATGAGGTGCAATCCAAGGTCCGACGACTAAATGATTTATGTAGACGAGCCATAATATTGGGTGAAGAAGGGTCTTTGTCCCAAGAGAGTTACTATATTGCTTTAGGTGCCGTAAAAGAGGCTTTAAAGCAATGTGCAAACATGAACTCTATTGAGAATGATGTGAGAGCTGACGCCTTAGCTATTCATGTTTGCAATGTTGAAGATGAGCATCAATCTAATAATGCTTATAACAAGAAGGTTCCTGATTCAAGGATGATTACTGGTAATAAGGCTGCAAGGACTGGTGTGGCCGCTAGGGATGTAGGGAGTGCAGAAAATACTGAAGGAAATAATGGAAAGGTATCTCAACTAGAAGCAGTGAGTAGACAAGATGGTTTTCAGCAAGTGGAACTGACAGATATGAGGCAACACAATGTCATGCCTATGCAGTTTCACAGTATGGTGCCTTCTCTGTTCCACGCGTCAACACAGTTTCATAACGCAGCTTCAACTCATTTGCATGACAATTGCCTTCCTCGTTAG 2232 0.3916 MDSSFLMGSTISEPRDDMEFESHEAAYAFYKEYAKSVGFGTAKLSSRRSRASKEFIDAKFSCIRYGNKQQSDDAINPRPSPKIGCKASMHVKRRQDGKWYVYSFVKEHNHELLPAQAHFFRSHRNTDPLGNDVRMRRRKNLTAVSKLFSAYQNVDCLENFLRNQHDKGRNLVLETGHAQLLLELFMHMQEENPKFFYAVDLNEEHRLRNVFWVDAKGMEDYTYFGDVVSLDTTYFTSKYKIPLVLFIGVNHHIQPTLLGCALVADETIYTLAWLLQTWLIAMGGRAPHVILTDQNEAMKAAVAAVLPGTRHCFCLWHILEKVSRQLEFLSAWHDSFMEKFNKCIYKSWTEEQFEKRWWKLVDKFNLRDVEWVQSLYEDRTRWVPTFMREISFVGLSTGSRTESLNALFDNYIQGDTSLREFIERYKVILEERYEEEAKANFDAWHETPELKSPSPFEKQMLFVYTHEIFKKFQVEVLGAAACHLKKENDDVTTTYTVKDFEDNQSYVVEWNKSNSDICCSCRSFEYKGYLCRHAIVVLQMSGVFSVPPKYVLQRLTNAAMSKHPISERLDEVQSKVRRLNDLCRRAIILGEEGSLSQESYYIALGAVKEALKQCANMNSIENDVRADALAIHVCNVEDEHQSNNAYNKKVPDSRMITGNKAARTGVAARDVGSAENTEGNNGKVSQLEAVSRQDGFQQVELTDMRQHNVMPMQFHSMVPSLFHASTQFHNAASTHLHDNCLPR 743
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dere1000066g0003 743 ProSiteProfiles Zinc finger SWIM-type profile. 506 542 IPR007527 GO:0008270
Dere1000066g0003 743 Pfam MULE transposase domain 227 320 IPR018289 -
Dere1000066g0003 743 PANTHER PROTEIN FAR1-RELATED SEQUENCE 10-RELATED 9 616 IPR031052 GO:0006355
Dere1000066g0003 743 SMART 26again6 517 544 IPR006564 GO:0008270
Dere1000066g0003 743 Pfam SWIM zinc finger 507 540 IPR007527 GO:0008270
Dere1000066g0003 743 Pfam FAR1 DNA-binding domain 29 114 IPR004330 -
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF FAR1 Dere1000066g0003 MULE 3.9e-26 CL0219