Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dere1000059g0061 ATGAAATGGCCACTCTGCATCAATCCGATTTCTCCCTCTCTCTGGCAGCTATTGAAATGGAAGTTGGTGAAATGCACGATCGATTTCAGCTATCTGGGGCAGTCAAAGAGGCATTCCGTCTTTACTCCGGCTTTTCTTCCTTCTCCCTTTGTTACAGATGCCGTACCTCTTCAGTCTATTGCTCCTAGGCCTATGGGTTCTAGAGTAGAGAGAATACCTATTGACTGTCTTTCCCTCGGGGGAACTCCCTTAATCCCAGAAGTGACGGAACTATCTTTATCTTCTCTTCCGAAAAGAGATGAAGTAGCCATGTTTGCAGCGCTTATGCCTGCAACTGAGGGAATCCTAAGTACGTCATTTCACCAAGCAGGTAGAGAAGGACTGCCTTACTTGTTCAAGCTTAAGTGGGCCAAGCTCTGCTCTGGTCCACCACCGGGTAGGGCTAGAAACCCCAAAAAAGAGCCCTTTTGGAATATCCTTCATAGGCTGGAAAGCGTGTTAAGGCACGTTCATCTCTATGGTGAGCAGTGGTCGCAGGGTGTCTTGTGGCCCCACTATACCCGTTATGCACGGGACCCCTGGAACAAGATGTTCTCAGGATGGGGTTTAGACAGATATGAGGCAATAGTTGGTCCTCAACTACCCCATGGTGTGGCGTACAAGAGGATAGTTACTGGTAGACTTGGGTGTTCATTAGGGGGTGCGGGGAAACGACGCGTGTTCGCTATTGGGAACTACGTGAATCAGCGTCTTTTACGACCTGTTCACGAGTGGCTCGGGGCTGTCTTACGTAGGCTTCCCACTTTTGGGACCTACTGGCAGACTCGACCGCTGGACCGGCTACAAGGAAAGCATGTATGTTACTCTTATGACTTGAAGTCGGCCACAGATAGGTGGCCGCTATACTTCTTGTTTAGGATAGTCCTATTTGATCGATCGTTTGCATCCTCTGCCGTGAACTCGGCACTGGCGTGCAACATCTTTCATGTGCCCTTCGTGAGCCACGGAGATTGCTGCCTTCCTCGTTCAGTGGGGAAGTCTATTCCCTCTCAATCAATGCCCGGGAGGGGCACTATGAGAAAGGGACTTCAAGAATACATACATCTGGAGATAGGCAATTTAGATAGACCGATTCCAATAGCGGTTAATCCCGCAAACTACCGGGAAGCCAACTACATAGTTCTTGGTCTTGTTGGAATATGCGCTGTTCTCTTTCCTGTTGATTTCGCGGGCGAAAGAGATATTTCATTAAGAATTAACAGAAGACTAGTTGTCAGAGCTAGTATGCCAGATGACATGGATCGAAAGAAGGAATCCCCGGCTATTGAATCTGGCAAGAAGGAAGGGAATGATTTCACATTAGTCAGAGAAGGAGTAGGAGGCACTGGTCTTTCTTTAGCAGGGATAGATCGAAAAAGAGAGAAAAACCGCTCGCACCCATCCACTGAAGCAGTAGCTGAGGAAGAAAGGACTGAGGAGACGGGAACCGAGCAAGAATCACCTGGTAAGACAGCAGAAGGAGAAAAAGACCAAAGTGATCCTGATGATGACGGAAGCTCCTCAAGTGAGTCATCCTCTGCCGAAGCGAGCCTTAAGTATATAGAGGAAAGAGTCCTCAAGATTACTCAAACTCCCAAGGCTCCTGTTACTCCGATCTCGCTGGCTTCATTCTCTGTGGATCCAAGGTCGCAGTCTGTTGGTGAAGGAACCCAGGCTTCTCGGACTATGACTCCAACGTCTGCTTTCAAACCTAGTGGCTCCTCCCAGCTAAAACTTAACGGGGTTGAAGCATCTTCTGTGGCTCAAGTGGTGACTACTTTACAAGAAAGGGGAGCAATGGAATACACTATTGTAGTAGCTGAAACAGCGGATTCTCCAGCTACATTACAATACCTCGCTCCTTATACAGGAGCAGCTCTGGCTGAATATTTTATGTACCGTGAACGACACACTTTAATCATTTATGACGATCCCTCCAAAGAAGCACAGGCTTATCGCCAAATCTCTCTTCTATTACGAAGACCACCGGGTCGCGAAGCTTATCCGGGAGATGTTTTTTATTTGCATTCACGCCTTTTGGAAAGAGCCGCTAAATCAAGTTCTCAGTTAGGTGAAGGAAGTACGACTGCTTTACCAATAGTTGAGACCCAATCGGGAGATGTTTCAGCTTATATTCCTACTAATGTAATTTCCATTACAGATGGCCAAATATTCTTATCCGCCGATCTATTCAATGCTGGAATCAGACCTGCGATTAATGTGGGTATTTCCCTCTCCAGAGTTGGATCTGCGGCTCAAATTAAAGCCATGAAACAAGTAGCTGAAGTCAGAGATTGGCTACGAGGGTTAATACGTAAACTAGCCAATCGGTACCTATCTCAAGCCCTCTCACGCCCCCTTTACCAGGGAATATCGTGGGAACCGACTTGGAAGGCTCTGCCAACGGATCGTAAGCGACCTGGTCAGTCTCGCCGTGAAAGAGGCATATTTGCCAATTTTACATCAGAGTTACTGTGGTTCGCTATGCTCCGTTTATCGATGTCTGTTAACCCTGCATTAGCATTAGGAATGACGCAGAAGCTTACATCGAAAGGATCAGCAGCCTTATGGTCATCCATTACCAGATATCCTCGTGATGAATGGAATGATTGGCTATCAAATATATCAGCCAATAGTTCTGTTACAATTCCAGAAAGTATTCTTATGGAGTTTGACAGTACTGGTGACTTATTTGGCTATCCTGGCAGGTTATCGCATTCAGTTGAGTCTGGTGCGGGCAAGAGGAGGGTGTTTGCCATAGGAAACTATGTCAATCAGAGGCTTCTCCGACCTCTCCATAATTGGTTAATGGAGGCGTTGGGAGATCTGAAAACAGATGGCACCTTTAATCAAAGTGCCCCTCTTGATAGACTAGTGGGTGCAAAGAAGATCTACTCTATCGATCTAAACCACAGATAG 2958 0.4692 MKWPLCINPISPSLWQLLKWKLVKCTIDFSYLGQSKRHSVFTPAFLPSPFVTDAVPLQSIAPRPMGSRVERIPIDCLSLGGTPLIPEVTELSLSSLPKRDEVAMFAALMPATEGILSTSFHQAGREGLPYLFKLKWAKLCSGPPPGRARNPKKEPFWNILHRLESVLRHVHLYGEQWSQGVLWPHYTRYARDPWNKMFSGWGLDRYEAIVGPQLPHGVAYKRIVTGRLGCSLGGAGKRRVFAIGNYVNQRLLRPVHEWLGAVLRRLPTFGTYWQTRPLDRLQGKHVCYSYDLKSATDRWPLYFLFRIVLFDRSFASSAVNSALACNIFHVPFVSHGDCCLPRSVGKSIPSQSMPGRGTMRKGLQEYIHLEIGNLDRPIPIAVNPANYREANYIVLGLVGICAVLFPVDFAGERDISLRINRRLVVRASMPDDMDRKKESPAIESGKKEGNDFTLVREGVGGTGLSLAGIDRKREKNRSHPSTEAVAEEERTEETGTEQESPGKTAEGEKDQSDPDDDGSSSSESSSAEASLKYIEERVLKITQTPKAPVTPISLASFSVDPRSQSVGEGTQASRTMTPTSAFKPSGSSQLKLNGVEASSVAQVVTTLQERGAMEYTIVVAETADSPATLQYLAPYTGAALAEYFMYRERHTLIIYDDPSKEAQAYRQISLLLRRPPGREAYPGDVFYLHSRLLERAAKSSSQLGEGSTTALPIVETQSGDVSAYIPTNVISITDGQIFLSADLFNAGIRPAINVGISLSRVGSAAQIKAMKQVAEVRDWLRGLIRKLANRYLSQALSRPLYQGISWEPTWKALPTDRKRPGQSRRERGIFANFTSELLWFAMLRLSMSVNPALALGMTQKLTSKGSAALWSSITRYPRDEWNDWLSNISANSSVTIPESILMEFDSTGDLFGYPGRLSHSVESGAGKRRVFAIGNYVNQRLLRPLHNWLMEALGDLKTDGTFNQSAPLDRLVGAKKIYSIDLNHR 985
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dere1000059g0061 985 MobiDBLite consensus disorder prediction 430 453 - -
Dere1000059g0061 985 Gene3D - 584 796 - -
Dere1000059g0061 985 Coils Coil 980 985 - -
Dere1000059g0061 985 ProSitePatterns ATP synthase alpha and beta subunits signature. 750 759 IPR020003 GO:0005524
Dere1000059g0061 985 MobiDBLite consensus disorder prediction 468 516 - -
Dere1000059g0061 985 MobiDBLite consensus disorder prediction 560 588 - -
Dere1000059g0061 985 Pfam Mitovirus RNA-dependent RNA polymerase 914 983 IPR008686 -
Dere1000059g0061 985 Pfam Mitovirus RNA-dependent RNA polymerase 225 308 IPR008686 -
Dere1000059g0061 985 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 589 765 IPR027417 -
Dere1000059g0061 985 Pfam ATP synthase alpha/beta family, nucleotide-binding domain 593 759 IPR000194 GO:0005524
Dere1000059g0061 985 PANTHER ATP SYNTHASE SUBUNIT ALPHA, MITOCHONDRIAL 596 775 IPR005294 GO:0015986|GO:0045261|GO:0046933
Dere1000059g0061 985 MobiDBLite consensus disorder prediction 430 529 - -
Dere1000059g0061 985 FunFam ATP synthase subunit alpha, mitochondrial 590 766 - -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dere1000059g0061 594 770 Primary Pumps ATPases(2) AT1G76030 31.461 4.76e-17 83.6