Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dere09g2411 ATGTTACTACTTCCAACCACCGTTGCTAGAGCCTTTCTTCACTATGCCATGGCCGCATCTAGGACAAATGTCAGCACCGAAGCCCTTAAACTTCATCCATATCAGCCACTGATCAATGTTGAAGTTGTTGCTCTTGTTACCAAACCTGAACTGCAATCTAGCAAGAGAATAAAATCAATGGTGAAGCAGATTGGTATTGGTGTAGATCCCCTGGCTGATGATGAAATAATTAGGAAACAATATAAGAAGTTGGCTTTCATGCTTTACCCTGATAAGAACAAGTCTATTGGAGCTAATGAGGCATTTAAACTTTTTTCAGAGGCATAG 327 0.4037 MLLLPTTVARAFLHYAMAASRTNVSTEALKLHPYQPLINVEVVALVTKPELQSSKRIKSMVKQIGIGVDPLADDEIIRKQYKKLAFMLYPDKNKSIGANEAFKLFSEA 108
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dere09g2411 108 Gene3D DnaJ domain 46 108 IPR036869 -
Dere09g2411 108 Pfam DnaJ domain 67 108 IPR001623 -
Dere09g2411 108 PANTHER BNAC03G44070D PROTEIN 66 108 - -
Dere09g2411 108 SUPERFAMILY Chaperone J-domain 66 108 IPR036869 -
Dere09g2411 108 CDD DnaJ 67 108 IPR001623 -
Dere09g2411 108 ProSiteProfiles dnaJ domain profile. 59 108 IPR001623 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dere09g2411 Dere-ChrDere09 36942697 36947255 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dere09g2411 43 108 SUVH1 or 3-interacting DNAJ domain-containing protein superfamily AT2G01710 35.211 1.44e-06 43.5