Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dere09g2401 ATGGAGCTTCCTGCATCTACGAGCTTCGAGGCAATTTCTAAGGCTTCGTTCTTCCCATTTTCTTCCAAACAAATTTTGTGTGGAAGCAATCTTCGTTGCCGGAATATTGGGTTCCCATGTTGTCGCAATTCAAAATCTGTCGTTGGAATCACGATGAGCTTAGAAAAAGATTACTTGTCAAATGAGTATGGCGAAAGACAGAGCGCTGGGACAAAATCTGGGTTTATCGATGTGATTGGCATTGGCAGCCGGAAGGAAGCAGTCATTGACTTCTGCTTGAAGTCGCCGTTCCAGTTATCGTCGCTGCGGTTTTGGAATATTCTCATGAAGGAACAAGAGGTTCAGTTACAATTAAGGACTAATGGAGAAGAATCTCTTCCAAGAATTGTTGAAGCTCCACTGTTTATGAAGTCAAGCTCAGAGGCTCTAATCCTTGTGGCTAGTGCAGGATATGGATCGGACCACATTGTTGCTGTTGATATTTTTAGAACAATAAAGTCTTCAAATGGATTAACAGTTGCTATAGTCTTGAAACCTTTTGTCTTTGAAGGGTTGAGGCGACGAGATGAGGTCAAAGGTTTGGTGGAGAAACTAAAGGAGAACGCACAATTACTCATTGAAATTGATATTGATGCACTACTCAAAAAGGACTTGGTGACTCTGGATGAGGCTGTGAAGAGTGCAAATGATGCAGTTTTGCTGGCCATTAATGCCATATCCGTTCTCAAATCTGAGACGCACAGAAAACTTATAGATGGTTTGCACAGTGGCATGAAAGAAGTCAGCATTTCAGAAATTAATAAAATATTGGAAAGCTATAAGGAAGCCAGAATAGGATTTGGAGCAGCATATAACATGAAAACTTCAATTCTACAGTCTTTATTTGACTGTCCTTTCCTCGGTGTCAGTTTAAAGGACCCAAATAGCATGGTTATATGCATTCTTGCATGTTCAATTCCAATCAATGATGATGATATTGCTGCCTTTCTGCATACTTTCCGTCAAACAACCAAATACGGCAAAGAAATAATAATATCTATAGACCATGAGCCTAATCTTGAGCCAAACCTCCTAATCACAACTGTTCTTACGCTGGGTAGTACAGATATGCAGCAGTCTTCCCAGAGTGGTGGCGTGCTTTCTAGACTTGCCCAGCATTTTCCTCTTTTTTTCAACTTTTGGGGGAGACATCAAAATCAACCAGTTGACACTTGGAAAGAGAATGCAACTGAAAATTTATCTCCTGAGGTGATTGAATTATATGACTTTAAGCGGGCTGATAGGATTGCTTCTGATGAGATAGATGACAAGTTTAATAAGTACCTTGAATCTTTTGAGCCATTAGTGGGGAGCAAAACTATGAAGACAAATGCTTCAAGGGGTTCTGAACAAAACATAGAAGAACTACTTGACACATGTTCTGAGTATGCCAGCCTTTATGATGAAATTACTGGAGGAGGTGACCCTGCTTGTCAAAGGGAGAAACTTAAAAATTGGAATCTTGGTCCTGGATACGAGGTGGCGAAGGAGTGGGCCAAAGATAGGGTAGGTGATGCTACACTGATGGCTGATATTGTTAGTATATTCAACCTTCCTGTTGGCGTAAGATCTTCAGAAGAGTTAAAAGATTGTTTAGAAGTCTCTATGGCACAAGACCCAGCAACAGAAAATGATGCCAGTGTACCAATGCAAAATAAAGGTATATCTCTGGAAGCAGTGATGGAATTTACATCTACGCTTTTAAATGGAAAGTACACTGATAAACCAAACAAGCAAGGAGTTCTTTCTGTTCGGGCAGCTTCTATGCTGGAAGTTGAACGTGGTTCATCTAAAAAATGGATTCCAATTGTGGAAATGCAATATAGGGGAGGACATTACAAGGGACGATGCCAAGGAGGTCTGCCTGAAGGGAAGGGGCGACTTGTCCTTGGAGATGGAAGTATATATGATGGTTTATGGCGCTATGGTAAGAGATCAGGTTCAGGCACATTCTATTTCACAAATGGAGATGTGTTCCAAGGATCGTGGAGGGATGATCTCATGCATGGCAAGGGTTGGTTTTATTTTCACACTGGCGATCGGTGGTTTGCAAACTTTTGGAAAGGAAAGGCTAATGGTGAGGGTCGCTTCTACACAAAGAATGGGGATGCCTTCTTTGGCAATTTTAAAGATGGATGGCGGCATGGGCAGTTTCTATGCATCAATGCTAATGGAACAAGGTACATCGAGATTTGGGAACATGGTGTTATATTAGAGAGTAAGCATTTAGACAAAGATGCTGGAGCAGGATGA 2292 0.4132 MELPASTSFEAISKASFFPFSSKQILCGSNLRCRNIGFPCCRNSKSVVGITMSLEKDYLSNEYGERQSAGTKSGFIDVIGIGSRKEAVIDFCLKSPFQLSSLRFWNILMKEQEVQLQLRTNGEESLPRIVEAPLFMKSSSEALILVASAGYGSDHIVAVDIFRTIKSSNGLTVAIVLKPFVFEGLRRRDEVKGLVEKLKENAQLLIEIDIDALLKKDLVTLDEAVKSANDAVLLAINAISVLKSETHRKLIDGLHSGMKEVSISEINKILESYKEARIGFGAAYNMKTSILQSLFDCPFLGVSLKDPNSMVICILACSIPINDDDIAAFLHTFRQTTKYGKEIIISIDHEPNLEPNLLITTVLTLGSTDMQQSSQSGGVLSRLAQHFPLFFNFWGRHQNQPVDTWKENATENLSPEVIELYDFKRADRIASDEIDDKFNKYLESFEPLVGSKTMKTNASRGSEQNIEELLDTCSEYASLYDEITGGGDPACQREKLKNWNLGPGYEVAKEWAKDRVGDATLMADIVSIFNLPVGVRSSEELKDCLEVSMAQDPATENDASVPMQNKGISLEAVMEFTSTLLNGKYTDKPNKQGVLSVRAASMLEVERGSSKKWIPIVEMQYRGGHYKGRCQGGLPEGKGRLVLGDGSIYDGLWRYGKRSGSGTFYFTNGDVFQGSWRDDLMHGKGWFYFHTGDRWFANFWKGKANGEGRFYTKNGDAFFGNFKDGWRHGQFLCINANGTRYIEIWEHGVILESKHLDKDAGAG 763
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dere09g2401 763 Pfam MORN repeat 631 647 IPR003409 -
Dere09g2401 763 Pfam MORN repeat 649 671 IPR003409 -
Dere09g2401 763 Pfam MORN repeat 719 730 IPR003409 -
Dere09g2401 763 Pfam MORN repeat 699 716 IPR003409 -
Dere09g2401 763 Pfam MORN repeat 672 694 IPR003409 -
Dere09g2401 763 SUPERFAMILY Tubulin nucleotide-binding domain-like 77 241 IPR036525 -
Dere09g2401 763 Gene3D - 624 684 - -
Dere09g2401 763 Gene3D Tubulin/FtsZ, GTPase domain 112 365 IPR036525 -
Dere09g2401 763 SMART morn 647 668 IPR003409 -
Dere09g2401 763 SMART morn 624 645 IPR003409 -
Dere09g2401 763 SMART morn 670 691 IPR003409 -
Dere09g2401 763 SMART morn 716 737 IPR003409 -
Dere09g2401 763 PRINTS Cell division protein FtsZ signature 170 191 IPR003008 GO:0005525
Dere09g2401 763 PRINTS Cell division protein FtsZ signature 264 285 IPR003008 GO:0005525
Dere09g2401 763 Gene3D - 697 759 - -
Dere09g2401 763 SUPERFAMILY Histone H3 K4-specific methyltransferase SET7/9 N-terminal domain 623 749 - -
Dere09g2401 763 PANTHER RADIAL SPOKE HEAD 1 HOMOLOG 105 758 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dere09g2401 Dere-ChrDere09 36694828 36716130 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dere09g2401 1 757 PP2C-type Phosphatase Gene Family AT1G75010 45.384 0.0 623