Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dere09g2389 ATGGCTGAACTTGTGGGTGGTTCTCTGCTTTCAGCATTTCTTCAGGTTATGTTTGATCGGATTGCCTCACCAGATTTTGTGGCCTTCATGCGTGGCAAAAATTCTACGGAAAAGTCACTCCAAAGGTTGAAGACAACGTTGTATGCTGCTGGGGCAGTGCTTCATGATGCTGACCAAAAGCAAATCAGAGATGCAGCTGTGAAGAATTGGCTGGATGATCTCAGAGATGCTGTCTATCGCGCCGATGACATGATAGATGAAATTTCCACTAAAGCTGCAACTCGAGTTGAGGTAGAAAACTGCTTCTATTGCTCTTTCGATTTGTATGATCGAAAGATAACACTCAAGATCGAAGACATAGTTAAAAGACTCGAATCAATTTTGAGACACAAAGATATTCTTGGTCTGAGAGAAAGTGTGGCAAGGGAGAAGTGGTCGTGGAGGCATCAGTCAACATCCCTAGTAGATGAATTTGATGTATTTGGCAGAGATAATTACAAAGAGGTCATAATTAAGTTGTTGCTTTCTAATGACATAGATGATGATAAGATATCCGTCATTCCCATTGTGGGTATGGGTGGGATTGGCAAAACCACTCTTGCCCAAGTAGCATACAATAATGATCAAGTGAAGCAGAAGTTTGATCTTAGAGCATGGGTTTGTGTTTCTGAAGAATTTGATGTCTCTAAGATTACCAAGAGTATAATAGAGTCTATCACCTCTCATGCTTGTGATATGAAAGATTTAAATTTACTTCAACTTGATCTCAAGGAGAAGTTGTCTGGGAAGAAATTCTTAGTTGTTTTGGATGATATTTGGAATGAGAATTACATGGATTGGGATCTTTTGCGAAGACCTTTTCAATATGGGAATGAAGGGAGTAAAATCCTTCTAACAACTCGTAGTGAAAAGGTTGCCTCGTTTGTCCGAACTCTTTCACCCTATCGTGTTGGTCAATTGTCTGATAATGATTGTTGGTTGATATTTGCAAAACATGCATGTCTCTGCATAGATTCTGTCAAGGATTCAAATCTGGAAAGATATGGTAGAGATATTGTTAAAAAATGTAAGGGGCTTCCTTTAGTTGCCAAAACTCTGGGAGGCCTTTTGCGCTTCAAATGTGATATTGGGGATTGGAATAACATACTGAAGAGTGAAATGTGGGACTTGTCGGAGAAGGAGAGCGAAATTCTGCCAGCTTTAAGAATCAGTTATCATTATCTCTCTCCGCAGTTAAAACAATGCTTTCTTTATTGCTCCATGTTTCCAAAAGATTATGAATTTGATAAGGATGAATTAATCATGTGGTGGATGGCTGAAGGTTTTTTAGAGCCACCACCGAATGGGAAGACTTTAGAAGAAGCTGGGGAAGAATATTTTCAAGATTTAGTTTCAAGATCATTTTTTCAGCCCTTATATAAAGATAAGAAGTTTTTTGTTGTGCATGACCTTATTCATGATCTAGCAACATTTGAAGCAAGAAAATTCTACAGCTACAGTCCGAGCAAGGGAAATGAAATTACCAACATGACACGTCATCTGTTTTGTGGAGAGGGAGACTTTAGCTCTATAAGCAAAGCAAAATCCTTGCAGACAATTATTGTAAGAAAAGAGTGTGGTGGTTTAATGCCGTCAAAGATATTTTCTGAGCTGAAGTGCTTGCGAGTTTTATCACTTTACAATGTTTTGTCTGGGGCTTTGCCAGATACGGTAAACAAATTGATCCATTTGCGTTATTTAAATCTCTCTCGCACAAATATTAAGAAGTTGCCTGATACATTATGTACCCTGTACAATCTACAAACACTATTACTGAGAGATTGTGATGGTCTTACAATGCTGCCCAATGACATGCAGAAGCTTGTGAACTTGCGATATCTTGATGTTTCCCATTCTAGATTACAAGGGATGCCAAGAGGAATTGGTAAAATGAAAATTTTGCATTTTTTGAGTGACTTTGTTCTGGACAAAGTTGAAGGTGCTAGTATTATAGAATTGGGTGGACTTCAAAATCTTTGCAACTCTTTGAAATTAAAGAACTTGCAGCACGTTGCCAACGGTGAGGAAGCCTCAAAGGCAAGATTGGTAGATAAGCAGTCAATTCAAAGTTTACATCTGATATGGAATGATGGTGGTGATATGGTTGACTCAAGAGACATACTTGACAATCTACAACCTCATGTGAACCTGAAACTTCTTATTATTGATGGATACAGGGCAGCTGCATTCCCTTATTGGTTAGGATGCCCATTATACCGCAATATAACTGCACTAATTCTTTATGATTGCATAAATTGCTACCAGCTGCCACCACTCGGGCAACTGCCCTCTCTGAAGGGTCTAGAGATTGATGGATTTGATGCCTTGGTGAAAATTGGTCCTGAGTTCTACAAGAATGATGATGATGCTTCATTGGCACCACCCTTTCCGTCCCTCGAATTTCTGGAATTTAGAAACATGCTTGGCTGGCAGGAATGGTGGTGTTCATATCACTCAAAGGCTTTTCCTCAACTGAAACATCTTACATTGAAGGGTTGTCCTAGATTATGTGACAATTTACCTAATCACCTTCCTGATTTGGAAACACTTCGCATTGATGAATGTGAACAGCTGGTGGCTTCTCCTATTCCCCGGGCTCGAGCAATATATATCAATGGCTGTAGAAAAATGAAATTTCTTGTGCAACATCATTTCGAACTTGTGGAGTCCATGGTTATAATTAATAGCTGTGACGCACTTACTTGCTTGCCATTGGATAACTTCCCCAATCTGCAACAATTCACAATCAATGGCTGTGAGAATCTCAAATGTGTTTCAAATTCAAAGGTTCCACTTGGACACCTCAAGCGTATTAAGCTAATTGATTGCCCCAGTCTTACATCTTTCCCAATAGAAGGATTATGTGCGCCCAACATGACTCATTTGGAATTGGTTGGATGCTGCAACTTGAAGTCATTGCTTGATCACAGGATGAGTCTTCCAATGTTACAACACATATCGCTAAGGGATTGCCCAGGTATTGAGTGGGTTCCTGGAAGGAGTTTGCCACCTAATTTGATGTTACTTTATATTGATCATTGGTCCTTTTCCCGCATATGCTGTTGTATGGAGTGGCAGTCTTCACGCAGTCTCACTTCTCTTTCATTAAGTGGTAGATATGATAATAATGTGCAGTTATTCCCAGAGGAGGAGTGTTTGCTGCCTTTCTCTCTTACCTTTCTATCCATTAGCAACTATTCAAGTCTGGAAACATTGGACTGCAAGGGATTCATGCACCTAAGCTCTCTGCATGAATTGAGAATCAAAGAATGCCCCAAGCTACAAAGAATAATAGGAAAAACGCTGCCTACTTCTCTCACACAGCTGCACATCTATGGGTGTTCTTTGCTTGGAGAACAGTGCCGCACTAAGAATGGGGAAATTTGGCCCAAAATTTCTCACATCACCAACATTTTTATTGATAATAACCGGTGA 3474 0.3972 MAELVGGSLLSAFLQVMFDRIASPDFVAFMRGKNSTEKSLQRLKTTLYAAGAVLHDADQKQIRDAAVKNWLDDLRDAVYRADDMIDEISTKAATRVEVENCFYCSFDLYDRKITLKIEDIVKRLESILRHKDILGLRESVAREKWSWRHQSTSLVDEFDVFGRDNYKEVIIKLLLSNDIDDDKISVIPIVGMGGIGKTTLAQVAYNNDQVKQKFDLRAWVCVSEEFDVSKITKSIIESITSHACDMKDLNLLQLDLKEKLSGKKFLVVLDDIWNENYMDWDLLRRPFQYGNEGSKILLTTRSEKVASFVRTLSPYRVGQLSDNDCWLIFAKHACLCIDSVKDSNLERYGRDIVKKCKGLPLVAKTLGGLLRFKCDIGDWNNILKSEMWDLSEKESEILPALRISYHYLSPQLKQCFLYCSMFPKDYEFDKDELIMWWMAEGFLEPPPNGKTLEEAGEEYFQDLVSRSFFQPLYKDKKFFVVHDLIHDLATFEARKFYSYSPSKGNEITNMTRHLFCGEGDFSSISKAKSLQTIIVRKECGGLMPSKIFSELKCLRVLSLYNVLSGALPDTVNKLIHLRYLNLSRTNIKKLPDTLCTLYNLQTLLLRDCDGLTMLPNDMQKLVNLRYLDVSHSRLQGMPRGIGKMKILHFLSDFVLDKVEGASIIELGGLQNLCNSLKLKNLQHVANGEEASKARLVDKQSIQSLHLIWNDGGDMVDSRDILDNLQPHVNLKLLIIDGYRAAAFPYWLGCPLYRNITALILYDCINCYQLPPLGQLPSLKGLEIDGFDALVKIGPEFYKNDDDASLAPPFPSLEFLEFRNMLGWQEWWCSYHSKAFPQLKHLTLKGCPRLCDNLPNHLPDLETLRIDECEQLVASPIPRARAIYINGCRKMKFLVQHHFELVESMVIINSCDALTCLPLDNFPNLQQFTINGCENLKCVSNSKVPLGHLKRIKLIDCPSLTSFPIEGLCAPNMTHLELVGCCNLKSLLDHRMSLPMLQHISLRDCPGIEWVPGRSLPPNLMLLYIDHWSFSRICCCMEWQSSRSLTSLSLSGRYDNNVQLFPEEECLLPFSLTFLSISNYSSLETLDCKGFMHLSSLHELRIKECPKLQRIIGKTLPTSLTQLHIYGCSLLGEQCRTKNGEIWPKISHITNIFIDNNR 1157
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dere09g2389 1157 Pfam Rx N-terminal domain 10 95 IPR041118 -
Dere09g2389 1157 Pfam NB-ARC domain 167 385 IPR002182 GO:0043531
Dere09g2389 1157 Gene3D Ribonuclease Inhibitor 503 879 IPR032675 -
Dere09g2389 1157 SUPERFAMILY L domain-like 910 1145 - -
Dere09g2389 1157 Gene3D - 31 130 - -
Dere09g2389 1157 SMART LRR_typ_2 574 597 IPR003591 -
Dere09g2389 1157 SMART LRR_typ_2 621 644 IPR003591 -
Dere09g2389 1157 PRINTS Disease resistance protein signature 259 273 - -
Dere09g2389 1157 PRINTS Disease resistance protein signature 356 370 - -
Dere09g2389 1157 PRINTS Disease resistance protein signature 186 201 - -
Dere09g2389 1157 PRINTS Disease resistance protein signature 855 871 - -
Dere09g2389 1157 Gene3D - 410 490 IPR036388 -
Dere09g2389 1157 Gene3D - 141 312 IPR027417 -
Dere09g2389 1157 SUPERFAMILY L domain-like 475 966 - -
Dere09g2389 1157 Gene3D Ribonuclease Inhibitor 885 1133 IPR032675 -
Dere09g2389 1157 FunFam Probable disease resistance protein At1g61300 145 312 - -
Dere09g2389 1157 Gene3D - 319 409 IPR042197 -
Dere09g2389 1157 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 145 419 IPR027417 -
Dere09g2389 1157 PANTHER DISEASE RESISTANCE PROTEIN RP 43 869 IPR044974 GO:0006952
Dere09g2389 1157 FunFam Probable disease resistance protein At1g63360 405 491 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dere09g2389 Dere-ChrDere09 36466500 36469973 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dere09g2389 184 367 WRKY Transcription Factor Family AT5G45050 27.513 2.46e-09 60.1