Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dere09g2378 ATGGGCAGTTGTGGAAGGGAAGGATCAGTGAGACAGTATATAAGATCGAAGGTCCCTCGTTTACGATGGACTCCTGAACTTCACCGCTGCTTTGTTCACGCCATTGAGACCCTTGGAGGTCATCACAAGGCCACGCCTAAGCTTGTTCTTCAGATGATGGATGTCAAAGGCCTCACTATTTCTCACGTTAAGAGCCATCTCCAGATGTACAGAAGCATGAGAGGTGATTTGGGCAGACAAGAAAGGGCATCGAGCCATCACAGAAGACAATCTTTTGAGGAACATGATGATGGGAGTGTTGATGAAGAGAATGATGGTGGTGATGGTGTTCTTCAAGCTTGTACAAAGAAAGAATCAGATTCTTACTTCAGCTACAGTAATTTCTCCCCAAAAAGAGCTAGAATGGAGACGAGGAGTTGCATCTCAGACAGGGAAAGAGGAGTGGCGAATCCGTACTGCTTTTATGATTATGTGCAGGCGATGGGAGAGCATAAGGGAATAAAGGAGGCTTCTTCTGCTTCAATGTGGCAGAGCCAATCTTTCTCTCTTATGCCGCATTTTCCCTTTCTCTCTTCTCTCAAATCTCCAACCCAACAATCTGATTTCCTTCAGGTTAAAGAAATAGTTAGCAGGAGCCCGTGTTCAGTGCCAATGAATGAAGCTGAGGGCACTGAAAGAGTAAATGTAGATGCAGAAGAAGAAGAAGAAGAAAGAAGAGGGTGTGAGTTATCACTATCTCTCTCACTGCCCAATCCTTCATCTAAGAGAAGCAATACTTGTACCAATGCTTCTTCAACCAGTGAGATCAGTGAGGCCTTCAGTAATTACAAGGACTGCTTTAGTTCTTCCACTGGAAAAGATAGAATTAACTTAGACCTGGCTATAGCCCTATGTGGCAATTGA 903 0.443 MGSCGREGSVRQYIRSKVPRLRWTPELHRCFVHAIETLGGHHKATPKLVLQMMDVKGLTISHVKSHLQMYRSMRGDLGRQERASSHHRRQSFEEHDDGSVDEENDGGDGVLQACTKKESDSYFSYSNFSPKRARMETRSCISDRERGVANPYCFYDYVQAMGEHKGIKEASSASMWQSQSFSLMPHFPFLSSLKSPTQQSDFLQVKEIVSRSPCSVPMNEAEGTERVNVDAEEEEEERRGCELSLSLSLPNPSSKRSNTCTNASSTSEISEAFSNYKDCFSSSTGKDRINLDLAIALCGN 300
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dere09g2378 300 SUPERFAMILY Homeodomain-like 17 72 IPR009057 -
Dere09g2378 300 PANTHER MYB FAMILY TRANSCRIPTION FACTOR PHL7-LIKE 7 97 IPR046955 GO:0003700
Dere09g2378 300 Pfam Myb-like DNA-binding domain 21 71 IPR001005 -
Dere09g2378 300 Gene3D - 18 74 - -
Dere09g2378 300 MobiDBLite consensus disorder prediction 215 243 - -
Dere09g2378 300 NCBIfam myb-like DNA-binding domain, SHAQKYF class 19 72 IPR006447 GO:0003677
Dere09g2378 300 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 15 75 IPR017930 -
Dere09g2378 300 MobiDBLite consensus disorder prediction 76 96 - -
Dere09g2378 300 MobiDBLite consensus disorder prediction 76 111 - -
Dere09g2378 300 FunFam Myb family transcription factor 17 75 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dere09g2378 Dere-ChrDere09 36199952 36204102 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dere09g2378 1 77 G2-like Transcription Factor Family AT1G14600 71.951 4.62e-35 125
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF GARP-G2-like Dere09g2378 Myb_DNA-binding 1e-06 CL0123