Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dere09g2354 ATGGCTCTGTATTCAATATCTCCTTTGAACCTTCTTTTCCATGTGGTGCTTCTTCTCATATGTTTAGCCAAAGAAGGTGAAGGTGAAGGTGTACTGTCAGAGAAGGCTGTGAGTGTGTTGAAGAAGCAGATATTAACAGAGCAAGATGCAGATAGAGTTCACAGATTGCCAGGCCAACCTGCAGTGAAGTTCAAGCACTATGCAGGTTATATCACTGTCAATCAAACCCATGGAAGAGCACTGTTCTATTGGTTCTTTGAGTCCACACATAAACCAGAAGAAAAACCTGTGCTTCTTTGGCTTAATGGAGGTCCAGGGTGCTCCTCAATTGGGTATGGAGAAGCAGAGGAGCTTGGACCCTTCTTTCCCCAGAACAGCACCAAACCAAAGCTAAAGTTGAATCCTTATTCTTGGAACAAAGCTGCAAATCTCTTGTTTGTGGAATCCCCTGTTGGAGTTGGATTTTCCTATACCAACATTACCACTGACATCCAGCAACTTGGTGACACAATCACTGCTAAGGACTCACACATCTTCATCATCAACTGGTTTCGCCGTTTTCCACAATTCAGATCCCATGAGTTCTACATTGCTGGTGAAAGCTATGCAGGGCACTACGTTCCCCAACTTTCTGAGCTCATTTTTGACAACAATCACAATCCCACCATGGATGACTACATCAACTTCAAAGGGCTCATTATTGGGAATGCATTACTGGACGATGAAACAGATCAAAAGGGAATGATAGACTATGCTTGGGATCACGCGGTGATATCTGATGCTTTGTATAAGAACATCACAAGCAGATGCAATTTCAGCCTTCAGAATCAAACCAATGACTGCACAGTTGAACTGAACAAGTACTTCGATGTGTATAAGATCATTGACATGTACAGCTTGTACACTCCCATGTGTACCTCCAACAACACCATTTCCAGAAGACAAGCTCCTCTCATCAATGGCGTAGCTCCCCACTCCTTCTCTAAATTTGATGCACCTTCGTCAATGCTTCCTCTTATCAAGAAGCTTATTGCTGGGGGTCTTCGCGTTTGGGTTTACAGTGGAGATACCGATGGGAGAATTCCAGTTACAGCAACAAGATACACACTAAGTAAATTGGGGCTCAGAATTATTGAAGATTGGACTCCCTGGTACACCAGCAAGCAGGTAGGTGGATGGACTGTTGTGTATGATGGACTAACCTATGTGACCATTAGAGGAGCTGGCCATCAGGTTCCTACTTTTGCTCCAAGGCAATCTCTTCAGCTAGTTCAACACTTCTTGACCAATAAGAAATTGCCACCTCATCCATTTGAATAA 1320 0.4356 MALYSISPLNLLFHVVLLLICLAKEGEGEGVLSEKAVSVLKKQILTEQDADRVHRLPGQPAVKFKHYAGYITVNQTHGRALFYWFFESTHKPEEKPVLLWLNGGPGCSSIGYGEAEELGPFFPQNSTKPKLKLNPYSWNKAANLLFVESPVGVGFSYTNITTDIQQLGDTITAKDSHIFIINWFRRFPQFRSHEFYIAGESYAGHYVPQLSELIFDNNHNPTMDDYINFKGLIIGNALLDDETDQKGMIDYAWDHAVISDALYKNITSRCNFSLQNQTNDCTVELNKYFDVYKIIDMYSLYTPMCTSNNTISRRQAPLINGVAPHSFSKFDAPSSMLPLIKKLIAGGLRVWVYSGDTDGRIPVTATRYTLSKLGLRIIEDWTPWYTSKQVGGWTVVYDGLTYVTIRGAGHQVPTFAPRQSLQLVQHFLTNKKLPPHPFE 439
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dere09g2354 439 ProSitePatterns Serine carboxypeptidases, histidine active site. 400 417 IPR033124 GO:0004185
Dere09g2354 439 PANTHER SERINE PROTEASE FAMILY S10 SERINE CARBOXYPEPTIDASE 52 417 IPR001563 GO:0004185|GO:0006508
Dere09g2354 439 Pfam Serine carboxypeptidase 329 430 IPR001563 GO:0004185|GO:0006508
Dere09g2354 439 Pfam Serine carboxypeptidase 58 314 IPR001563 GO:0004185|GO:0006508
Dere09g2354 439 SUPERFAMILY alpha/beta-Hydrolases 48 433 IPR029058 -
Dere09g2354 439 Gene3D alpha/beta hydrolase 47 307 IPR029058 -
Dere09g2354 439 PRINTS Carboxypeptidase C serine protease (S10) family signature 147 157 IPR001563 GO:0004185|GO:0006508
Dere09g2354 439 PRINTS Carboxypeptidase C serine protease (S10) family signature 134 146 IPR001563 GO:0004185|GO:0006508
Dere09g2354 439 PRINTS Carboxypeptidase C serine protease (S10) family signature 400 413 IPR001563 GO:0004185|GO:0006508
Dere09g2354 439 PRINTS Carboxypeptidase C serine protease (S10) family signature 183 208 IPR001563 GO:0004185|GO:0006508
Dere09g2354 439 Gene3D alpha/beta hydrolase 318 435 IPR029058 -
Dere09g2354 439 FunFam Carboxypeptidase 47 307 - -
Dere09g2354 439 ProSitePatterns Serine carboxypeptidases, serine active site. 197 204 IPR018202 GO:0004185
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dere09g2354 Dere-ChrDere09 35542596 35553814 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dere09g2354 347 433 Calmodulin-binding Proteins AT2G22960 36.364 2.03e-13 66.6