Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dere09g2353 ATGCGCAATGCGCTTTCCTCGGACCTGCATGGCACAGCTACACCTATGATGTTTCAGTACTGCACCGAACCTTTCAGAATGGAGCAAATCATTGAAAGATATCAAAGAGCTACTGGAGTTCGCATACCTGAAAATAATAGTCAGGAGACTCTGCATCTTGATCTGGGGATTCAAAAGTATGTTGGAGAGGGCATCAACTCCCTACGGTACGAGGAACTGACTAGGATTGAACAAGAACTTGAGAACTCTGTCACCAAGGTCCGAAACCGTAAGAATGATCTCTTGCAACAGCAACTGGATAATCTGCTAAGAAAGGAAAGAATCATGGAAGAGGAAAACAGCAATTTGACCCATTGGATTCAAGAGCAGCGAGCAGTGATGGAGGAAGAAGGGCAAATGGTGGAGCAGTTTCCATTTTATGAGGACCAGCCTTCTTCTGCTGCTGCTGCTGCTGGTAGCATCCTTCAACTAGCTCCCCTGCAGCTTCCTCCTCATCTTCACCCTTATCTTCAGCTTGCTCAGCCCAACATTCATGACTCTCACCCTCAACAATGAGCAGAATCGGACATGCAAGCTAGCTTTGTTGAGAATTATGATGAAGTTCCAGATAAAGATTAA 618 0.4547 MRNALSSDLHGTATPMMFQYCTEPFRMEQIIERYQRATGVRIPENNSQETLHLDLGIQKYVGEGINSLRYEELTRIEQELENSVTKVRNRKNDLLQQQLDNLLRKERIMEEENSNLTHWIQEQRAVMEEEGQMVEQFPFYEDQPSSAAAAAGSILQLAPLQLPPHLHPYLQLAQPNIHDSHPQQXAESDMQASFVENYDEVPDKD 205
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dere09g2353 205 Coils Coil 70 112 - -
Dere09g2353 205 MobiDBLite consensus disorder prediction 175 205 - -
Dere09g2353 205 Pfam K-box region 51 120 IPR002487 GO:0003700|GO:0005634|GO:0006355
Dere09g2353 205 MobiDBLite consensus disorder prediction 176 191 - -
Dere09g2353 205 ProSiteProfiles K-box domain profile. 36 126 IPR002487 GO:0003700|GO:0005634|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dere09g2353 Dere-ChrDere09 35533098 35539549 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dere09g2353 12 179 MADS-box Gene Family AT5G23260 36.181 3.87e-30 110