Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dere09g2341 ATGTCTAACTCTGACGGAAACACCACCAACGGTAACGGCGTCAGCAACGGCTCAATCATTGACCCGCAGAGGCAGCAGCAGCAGCAGCAGTCGTCGTCGGGTAACGGCGCTCTCGCTGTCAAGAAGCCGCCGTCGAAGGACCGGCACAGCAAGGTGGACGGTCGAGGACGCCGTATACGCATGCCGATCATATGCGCCGCACGTGTTTTCCAGCTCACGCGTGAGTTGGGTCACAAATCTGATGGTCAAACCATCGAGTGGCTTCTCCGGCAGGCTGAGCCCTCCATTATAGCCGCCACCGGGACCGGGACCACTCCGGCTAGCTTTTCCTCCGTCTCCGTCTCGGTCCGCGGCGGCGTGGGCGGCGGAGGAGGAGGTTCGAACTCCCTGTCCTCGTCTTCCACCACGTCTACTTCTCTGGACCACAAGCCCACCCTGTTGGGTCCGACCCCCTTCATACTCGGAAAGCGCATACGGACCACCGATGACGACGCCTCCAAGGATGATGGCGTTTCTGTGGGACCCACCGTGGGGTCTATAGTAGGACCTACGACCCCAGCAGGGTTGTGGGCCCTTCCGGCGAGGCCCGACTTCGGCCAGGTTTGGAGCTTCGCTGCAGCTGCGGCGGCTCCTCCGCCGGAGATGGTGGTGCAGCCTGGAGGGGTGTCGGTGTCACAGCAGCAGCAGCATCATGCTTCATTATTCGTTCATCATCATCAGCAGCAACAAGCCATGGGCGAGGCGTCAGCGGCGAGACTGGGAAATTACCTTCCAGGGCATCTCAATTTGCTGGCTTCTTTGTCGGCTGGGCCCGGGAATTCGGGTCGGAGAGACGACGAGCCTCGCTGA 849 0.6137 MSNSDGNTTNGNGVSNGSIIDPQRQQQQQQSSSGNGALAVKKPPSKDRHSKVDGRGRRIRMPIICAARVFQLTRELGHKSDGQTIEWLLRQAEPSIIAATGTGTTPASFSSVSVSVRGGVGGGGGGSNSLSSSSTTSTSLDHKPTLLGPTPFILGKRIRTTDDDASKDDGVSVGPTVGSIVGPTTPAGLWALPARPDFGQVWSFAAAAAAPPPEMVVQPGGVSVSQQQQHHASLFVHHHQQQQAMGEASAARLGNYLPGHLNLLASLSAGPGNSGRRDDEPR 282
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dere09g2341 282 MobiDBLite consensus disorder prediction 1 38 - -
Dere09g2341 282 ProSiteProfiles TCP domain profile. 45 99 IPR017887 -
Dere09g2341 282 MobiDBLite consensus disorder prediction 120 152 - -
Dere09g2341 282 PANTHER TRANSCRIPTION FACTOR TCP4-RELATED 16 258 IPR005333 GO:0003700
Dere09g2341 282 MobiDBLite consensus disorder prediction 42 57 - -
Dere09g2341 282 MobiDBLite consensus disorder prediction 125 144 - -
Dere09g2341 282 MobiDBLite consensus disorder prediction 1 57 - -
Dere09g2341 282 Pfam TCP family transcription factor 45 119 IPR017887 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dere09g2341 Dere-ChrDere09 35241267 35242115 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dere09g2341 33 282 TCP Transcription Factor Family AT5G23280 65.000 9.95e-97 283
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF TCP Dere09g2341 TCP 1.4e-31 No_clan