Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dere09g2336 ATGTCTCGGACATCCAGGGTCCCACCTGCCATCCAGTGTATCAAATCAATGCCGGCTGAGTTCAAGTTAACAGGTAATCCAACCCCTGATCTCCTGGGAAAACATGGAAATGTTATTGTGGGAAGCACTGATGTAATAGCATCAAGTAGTCCTGAAAATGGTGCTATAGGAAGGAAAGTTTCTGAGGAACTTCAGGACCTTGCTGGTGACATGGATTTCATTGATGATGAGGAGTCGCCATATGGTGAAAAAATTATATCATCAGAAAGTAGGCCCTCAATTGGTGATGAAGAAGTAGAATCTGTACCTCTGCCCCTCTCATCAATCTCAAAATCTTCCCTGGAAAGCAGGTGGAGTGATACAACACCTTATGCTTCAAAAAAGAAGCTTCAATCATGGTTTCAACTTCCAAATGGAAATTGGGAGCTGGGGAACTTAATATCAACTTCTGGAACTGAATCTGTTATTTCATTGCCTGATGGGAAGGTTTTAAAGGTGAAAGGCGAAAATTTGGTACCGGCAAATCCTGATATTCTTGATGGAGTGGATGACCTTATGCAACTTAGTTATTTAAATGAACCTTCGGTTTTATACAATCTGCAATATAGATACAATCAGAATATGATTTATACAAAAGCTGGGCCAGTTTTGGTTGCCATAAATCCCTTTAAGAAAGTTCCTTTGTATGGAAATGATTACATCGAAGCATACAAGCGGAAAACAATCGAGAGCCCTCATGTTTATGCCATTACAGACACTGCCATTCGGGAAATGATACGAGATGAAGTAAATCAATCTATTATTATAAGTGGCGAAAGTGGAGCAGGGAAGACTGAGACGGCGAAGATAGCAATGCAGTACTTGGTTGCTCTCGGTGGTGGAAGTGGAATAGAGTATGAGATATTAAAGACTAATCCAATACTAGAAGCCTTTGGTAATGCAAAAACATTGAGAAATGACAACTCAAGTCGTTTTGGAAAGCTCATTGAGATACACTTCAGTGAGACTGGAAAAATATCAGGTGCTAATATTCAAACATGTAAGTTTACTGCTGAATTGTGTGACACTTCTGATTTGGCATTTGAACAGTCTAGAGTAGTCCAATGCAATGAAGGAGAAAGGTCATATCATATATTTTATCAGCTATGTGCTGGGGCAGCACCATACTTGAGGGAGAAGCTGAATCTACAAAGTGCAAAAGACTATAAATATCTGAGGCAGAGCAATTGTTATTCCATAGCTGGTGTTAATGATGCAGAAGAATTTTGCATAGTCATGGAAGCTCTGGATATTGTCCACATCAGCAAAGAAGACCAGGAGATTGTATTTGCGATGCTTGTTGCAGTCTTATGGCTAGGAAACATATCTTTCACTGTGATTGATAATGAAAATCATGTTGAAGCTGTAGAAGATGTGGCTCTGTTCAGCGTTGCCAAATTGATAGGTTGTGACATTGGAGATCTTAAGTTGACTTTATCAACTCGCAAAATGAAAGTTGGTAATGATAATATTGTTCAAAAGTTAACGCTATCACAGGCTATTGATGCAAGAGATGCCTTGGCAAAGTCAATATATGCGTGTCTCTTTGATTGGCTGATTGAACAGATAAACAAATCACTTGCTGTTGGCAAAAGGCGTACAGGCAGATCTATCAGTATTCTAGATATATATGGCTTTGAATCATTTGATAGGAATAGTTTTGAGCAGTTCTGCATCAATTATGCAAATGAGAGACTGCAGCAACACTTCAATCGTCATTTATTTAAGTTAGAACAGGAGGAATATATACAAGATGGCATTGACTGGGCAAAAGTTGAATTTGAAGACAACCAAGACTGCCTTAATCTTTTTGAAAAGAAGCCACTGGGATTACTATCTCTGTTAGATGAAGAATCCACTTTCCCTAATGGCACAGATTTGACATTTGCTAACAAGCTTAAGCAGCATTTGAATTCCAATTCAAGTTTCAGAGGAGAGCGAGACAAAGCTTTTACTGTGTGTCATTATGCTGGGGAGGTCACCTATGATACAACTGGATTTCTGGAGAAAAATAGGGACCTATTGCACTTGGATTCCATTCAACTTCTATCCTCATGCACATGTCATCTTCCTCAGATATTTGCATCCCATATGCTTACTCAGTCTGAGAAGCCTGTTGTTGGTCCGTTACATAAATTAGGTGGAGCTGATTCCCAAAAGCTAAGTGTTGCAACAAAATTCAAGGGTGAACTGTTCCAACTGATGCAACGTTTGGAGAGCACCACTCCTCACTTTATTCGCTGTATTAAGCCCAATAACCTGCAGTCACCGGGATCATATGAGCAAGGTCTTGTGCTACAGCAGCTTAGATGTTGTGGGGTCCTGGAAGTGGTTCGAATATCAAGATCAGGCTTTCCTACTAGAATGTCTCACCATAAGTTTGCCAGAAGATATGGTTTTCTTCTCCTGGAGAATGTTGCATCTCAGGATCCACTTAGTGTTTCAGTTGCAATTCTTCACCAGTTTAATATTTTGCCCGAGATGTATCAAGTTGGTTACACAAAATTATTTTTCCGACCAGGCCAGATTGGAGTGCTTGAAGATACTAGAAATCGTACCCTTCATGGCATTTTACGTGTCCAAAGTTGCTTCAGGGGTCACCAAGCTCGATGTTACCTGAAGGAACTTAGGAGAGGAATCATTACTCTTCAGTCATTTATTAGGGGGAAAAACACCAGAAATGAATATGCAGCTTCACTTAAGCGACGTAGAGCTGCCATTGTCATACAGAAGCGGATGAAAGCAGTATTTGTAAGAAGAAGAATGAAGAATACTAATGAAGCTGCAATTGTTATACAATCAGCCATTCGTGGTTGGTTAGTCAGAAAATGCTCAGGAGATTTAGGATCATTGAAATCTGGAGGCATGAAGATGAATGAGTCTGATGAGGTACTTGTCAAGTCTTCCTTCTTATCTGAATTACAACGCCGGGTGCTCAAGGCAGAAGCTGCATTGAGAGAGAAGGAAGAGGAAAATGACATTCTCCACCAACGTCTTCAACAGTATGAGAGCCGTTGGTCTGAGTATGAATTGAAGATGAAGTCTATGGAAGAAGTGTGGCAGAAACAAATGAGATCACTACAGTCTAGCCTCTCCATTGCAAAGAAGAGCCTTGCGATTGATGATTCTGAGAGAAATTCAGATGCATCTGTCAATGCAAGTGATGAGAGAGATTATGGTTGGGATATAGGAAATAATCATAGACGCCAAGAAAGCAATGGGGCAAGATCAATGAGTGCAGGCTTGAGTGTTATAAGTAGGTTGGCTGAAGAATTTGAGCAGAGGAGTCAAGTGTTTGGTGACGATGCAAAGTTCTTGGTGGAGGTAAAATCTGGTCAAGTTGAAGCAAGTTTGAATCCAGACCAGGAGCTTAGACGGTTGAAACAGATGTTCGAAGCATGGAAAAAGGATTATGGTTCAAGACTACGTGAAACCAAGGTCATTTTACATAAGCTTGGAAGTGAAGAAGGTGCAGTTGACAAAGTGAAGAAGAAGTGGTGGGGAAGAAGGAACAGTACAAGGATAAATTGA 3570 0.4031 MSRTSRVPPAIQCIKSMPAEFKLTGNPTPDLLGKHGNVIVGSTDVIASSSPENGAIGRKVSEELQDLAGDMDFIDDEESPYGEKIISSESRPSIGDEEVESVPLPLSSISKSSLESRWSDTTPYASKKKLQSWFQLPNGNWELGNLISTSGTESVISLPDGKVLKVKGENLVPANPDILDGVDDLMQLSYLNEPSVLYNLQYRYNQNMIYTKAGPVLVAINPFKKVPLYGNDYIEAYKRKTIESPHVYAITDTAIREMIRDEVNQSIIISGESGAGKTETAKIAMQYLVALGGGSGIEYEILKTNPILEAFGNAKTLRNDNSSRFGKLIEIHFSETGKISGANIQTCKFTAELCDTSDLAFEQSRVVQCNEGERSYHIFYQLCAGAAPYLREKLNLQSAKDYKYLRQSNCYSIAGVNDAEEFCIVMEALDIVHISKEDQEIVFAMLVAVLWLGNISFTVIDNENHVEAVEDVALFSVAKLIGCDIGDLKLTLSTRKMKVGNDNIVQKLTLSQAIDARDALAKSIYACLFDWLIEQINKSLAVGKRRTGRSISILDIYGFESFDRNSFEQFCINYANERLQQHFNRHLFKLEQEEYIQDGIDWAKVEFEDNQDCLNLFEKKPLGLLSLLDEESTFPNGTDLTFANKLKQHLNSNSSFRGERDKAFTVCHYAGEVTYDTTGFLEKNRDLLHLDSIQLLSSCTCHLPQIFASHMLTQSEKPVVGPLHKLGGADSQKLSVATKFKGELFQLMQRLESTTPHFIRCIKPNNLQSPGSYEQGLVLQQLRCCGVLEVVRISRSGFPTRMSHHKFARRYGFLLLENVASQDPLSVSVAILHQFNILPEMYQVGYTKLFFRPGQIGVLEDTRNRTLHGILRVQSCFRGHQARCYLKELRRGIITLQSFIRGKNTRNEYAASLKRRRAAIVIQKRMKAVFVRRRMKNTNEAAIVIQSAIRGWLVRKCSGDLGSLKSGGMKMNESDEVLVKSSFLSELQRRVLKAEAALREKEEENDILHQRLQQYESRWSEYELKMKSMEEVWQKQMRSLQSSLSIAKKSLAIDDSERNSDASVNASDERDYGWDIGNNHRRQESNGARSMSAGLSVISRLAEEFEQRSQVFGDDAKFLVEVKSGQVEASLNPDQELRRLKQMFEAWKKDYGSRLRETKVILHKLGSEEGAVDKVKKKWWGRRNSTRIN 1189
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dere09g2336 1189 ProSiteProfiles IQ motif profile. 889 918 IPR000048 GO:0005515
Dere09g2336 1189 SMART iq_5 937 959 IPR000048 GO:0005515
Dere09g2336 1189 SMART iq_5 888 910 IPR000048 GO:0005515
Dere09g2336 1189 SMART iq_5 865 887 IPR000048 GO:0005515
Dere09g2336 1189 SMART iq_5 914 936 IPR000048 GO:0005515
Dere09g2336 1189 FunFam Unconventional myosin-XIX 562 754 - -
Dere09g2336 1189 Gene3D Myosin VI head, motor domain, U50 subdomain 435 732 - -
Dere09g2336 1189 MobiDBLite consensus disorder prediction 1057 1089 - -
Dere09g2336 1189 Gene3D Kinesin motor domain 183 793 IPR036961 -
Dere09g2336 1189 Pfam Myosin head (motor domain) 182 852 IPR001609 GO:0003774|GO:0005524|GO:0016459
Dere09g2336 1189 Gene3D - 797 865 - -
Dere09g2336 1189 Coils Coil 984 1032 - -
Dere09g2336 1189 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 154 910 IPR027417 -
Dere09g2336 1189 PANTHER MYOSIN 173 1184 - -
Dere09g2336 1189 Gene3D - 560 754 - -
Dere09g2336 1189 ProSiteProfiles IQ motif profile. 868 895 IPR000048 GO:0005515
Dere09g2336 1189 ProSiteProfiles Myosin motor domain profile. 180 864 IPR001609 GO:0003774|GO:0005524|GO:0016459
Dere09g2336 1189 Gene3D - 374 433 - -
Dere09g2336 1189 ProSiteProfiles IQ motif profile. 938 967 IPR000048 GO:0005515
Dere09g2336 1189 FunFam Myosin heavy chain 374 430 - -
Dere09g2336 1189 ProSiteProfiles Myosin N-terminal SH3-like domain profile. 127 176 IPR004009 GO:0003774|GO:0005524|GO:0016459
Dere09g2336 1189 ProSiteProfiles IQ motif profile. 915 941 IPR000048 GO:0005515
Dere09g2336 1189 PRINTS Myosin heavy chain signature 550 578 IPR001609 GO:0003774|GO:0005524|GO:0016459
Dere09g2336 1189 PRINTS Myosin heavy chain signature 210 229 IPR001609 GO:0003774|GO:0005524|GO:0016459
Dere09g2336 1189 PRINTS Myosin heavy chain signature 264 289 IPR001609 GO:0003774|GO:0005524|GO:0016459
Dere09g2336 1189 PRINTS Myosin heavy chain signature 603 631 IPR001609 GO:0003774|GO:0005524|GO:0016459
Dere09g2336 1189 PRINTS Myosin heavy chain signature 306 333 IPR001609 GO:0003774|GO:0005524|GO:0016459
Dere09g2336 1189 Pfam IQ calmodulin-binding motif 940 956 IPR000048 GO:0005515
Dere09g2336 1189 Pfam IQ calmodulin-binding motif 890 909 IPR000048 GO:0005515
Dere09g2336 1189 Pfam IQ calmodulin-binding motif 870 887 IPR000048 GO:0005515
Dere09g2336 1189 SMART MYSc_2a 174 865 IPR001609 GO:0003774|GO:0005524|GO:0016459
Dere09g2336 1189 CDD MYSc_Myo8 194 852 IPR036022 -
Dere09g2336 1189 Gene3D - 868 915 - -
Dere09g2336 1189 Gene3D - 916 960 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dere09g2336 Dere-ChrDere09 35125149 35147935 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dere09g2336 6 1187 Myosins gene family AT1G50360 75.253 0.0 1807