Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dere09g2325 ATGGACGAGGAATTAGGTCCAAGTGCTTCAGCTACAACAATTGACTCTTCGAATGTTGGCTTCCAGCTCTTGAAAAAGCATGGATGGAAAGAAGGAACAGGTCTTGGGATCTCTGAGCAGGGTAGACTGGAACCTGTGGAAGCTTATGTGAAAAATAACAAACGAGGTTTGGGAGCTGATAAAGTGAAGAAAAAGGCTGTGAAAACTCATGTGGCTGATGCCTCTAAAGAGAAGAGTAAGCAGGAACTGTCTCCAAAGAAACCCAAGGCACTTTCTAAACGGATGAGAAGGATGCAGGAAATGGAAAAGAAGATGCAGGAAAAGGAATTTGAGCGTGCTTTTTTCAGGGAGTTCTGGCCAGAAAATGTTTAG 372 0.4355 MDEELGPSASATTIDSSNVGFQLLKKHGWKEGTGLGISEQGRLEPVEAYVKNNKRGLGADKVKKKAVKTHVADASKEKSKQELSPKKPKALSKRMRRMQEMEKKMQEKEFERAFFREFWPENV 123
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dere09g2325 123 ProSiteProfiles G-patch domain profile. 16 62 IPR000467 GO:0003676
Dere09g2325 123 Pfam G-patch domain 17 59 IPR000467 GO:0003676
Dere09g2325 123 Coils Coil 91 111 - -
Dere09g2325 123 PANTHER BAT4 PROTEIN-RELATED 8 123 IPR039146 -
Dere09g2325 123 SMART G-patch_5 14 60 IPR000467 GO:0003676
Dere09g2325 123 MobiDBLite consensus disorder prediction 60 104 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dere09g2325 Dere-ChrDere09 34891807 34903380 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dere09g2325 3 119 C2H2 Transcription Factor Family AT5G26610 31.933 7.22e-11 56.2