Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dere09g2324 ATGGATTTGGACCAGTGGATCGCGAAGGTGAAGGAAGGGCAGCATCTTCTGGAAGACGAGCTTCAGCTTCTTTGCGAATATGTAAAAGAGATCCTCATTGAGGAGTCCAACGTGCAGCCTGTCAACAGTCCAGTAACTGTTTGTGGTGATATTCATGGACAATTTCATGATCTAATGAAACTTTTCCAGACTGGAGGACATGTGCCTGAGACAAATTATATCTTTATGGGAGACTTTGTTGATAGAGGGTACAATAGTTTAGAAGTTTTCACCATCCTTTTACTTCTAAAAGCTAGATACCCGGCTAATATTACCCTTTTGAGAGGAAATCATGAAAGTAGACAGCTAACCCAGGTCTATGGATTTTATGATGAATGCCAGAGGAAGTATGGAAATGCTAATGCTTGGCGGTATTGTACAGATGTTTTCGACTACCTAACACTTTCTGCAATAATAGATGGAACTGTGCTTTGTGTTCATGGGGGCCTTTCTCCTGACATTCGAACAATTGATCAGATAAGGGTTATTGACAGGAACTGTGAAATTCCACATGAGGGACCATTTTGTGATCTTATGTGGAGTGATCCTGAAGATATTGAAACGTGGGCAGTCAGTCCCCGAGGAGCAGGTTGGCTTTTTGGATCGAGGGTCACTACTGAGTTCAATCACATAAATAATCTTGATCTTGTTTGTCGAGCACATCAACTTGTGCAAGAAGGCCTTAAGTATATGTTTCAAGATAAAGGCCTGGTAACTGTATGGTCTGCGCCAAATTACTGTTACCGATGTGGAAATGTTGCTTCTATTTTGAGTTTCAATGAAAATATGGAGAGAGAAGTTAAATTTTTCACTGAAACTGAGGAGAACAACCAGATGAGAGGGCCTAGGACAGGCGTTCCATATTTCTTGTAA 912 0.4112 MDLDQWIAKVKEGQHLLEDELQLLCEYVKEILIEESNVQPVNSPVTVCGDIHGQFHDLMKLFQTGGHVPETNYIFMGDFVDRGYNSLEVFTILLLLKARYPANITLLRGNHESRQLTQVYGFYDECQRKYGNANAWRYCTDVFDYLTLSAIIDGTVLCVHGGLSPDIRTIDQIRVIDRNCEIPHEGPFCDLMWSDPEDIETWAVSPRGAGWLFGSRVTTEFNHINNLDLVCRAHQLVQEGLKYMFQDKGLVTVWSAPNYCYRCGNVASILSFNENMEREVKFFTETEENNQMRGPRTGVPYFL 303
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dere09g2324 303 CDD MPP_PP2A_PP4_PP6 2 285 - -
Dere09g2324 303 FunFam Serine/threonine-protein phosphatase 1 303 - -
Dere09g2324 303 SUPERFAMILY Metallo-dependent phosphatases 2 286 IPR029052 -
Dere09g2324 303 PRINTS Serine/threonine phosphatase family signature 249 265 IPR006186 GO:0016787
Dere09g2324 303 PRINTS Serine/threonine phosphatase family signature 73 100 IPR006186 GO:0016787
Dere09g2324 303 PRINTS Serine/threonine phosphatase family signature 226 246 IPR006186 GO:0016787
Dere09g2324 303 PRINTS Serine/threonine phosphatase family signature 141 167 IPR006186 GO:0016787
Dere09g2324 303 PRINTS Serine/threonine phosphatase family signature 106 130 IPR006186 GO:0016787
Dere09g2324 303 PRINTS Serine/threonine phosphatase family signature 170 197 IPR006186 GO:0016787
Dere09g2324 303 PRINTS Serine/threonine phosphatase family signature 44 71 IPR006186 GO:0016787
Dere09g2324 303 PANTHER SERINE/THREONINE-PROTEIN PHOSPHATASE PP2A-RELATED 2 303 IPR047129 GO:0004722
Dere09g2324 303 ProSitePatterns Serine/threonine specific protein phosphatases signature. 107 112 IPR006186 GO:0016787
Dere09g2324 303 Gene3D - 1 303 IPR029052 -
Dere09g2324 303 SMART pp2a_7 16 287 IPR006186 GO:0016787
Dere09g2324 303 Pfam Calcineurin-like phosphoesterase 44 235 IPR004843 GO:0016787
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dere09g2324 Dere-ChrDere09 34875916 34887650 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dere09g2324 43 221 Calmodulin-binding Proteins AT5G63870 37.500 3.69e-29 111