Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dere09g2313 ATGAATTCGAGCCCAAATTACAGTAACAGTAACGGCTACCATCGGCAGCAACAGCAGAGTTCAGAAATGCGGTTCGGAATGCGTCACAGAGAGCGAGTCCGCCGTGGAGCTCGTAGGTCACGTGATTCCAGAGACGGCGCTGGTAGCCTTAGGGTTTCCGACCAGCAGCAACAACACCAGTATAGACCTCCTTGTACGGACTTCGACAAAGCCTATTTCCATTCTTACGCTCACGTTGGTATCCACGAGGAGATGATCAAGGATCGGGTGCGGACTGAAACTTACAGGGCTGCAATCATGCGACATCAGAGTTTGATTGCAGGCAAAGTAGTAGTGGATGTTGGATGTGGCACTGGCATCCTTTCCATATTTTGTGCTCAGGCTGGTGCAAAGCGGGTGTATGCAGTTGATGCTAGTGACATTGCCTTGCAGGCAATTGAAGTGGTGAAAGCAAATAATCTATCTGATGTTGTCATCGTAGTGCATGGACGTGTTGAGGATATTGAAATAGATGAAGAGGTTGATGTTATAATTTCAGAATGGATGGGATATATGCTCCTATATGAGAGCATGCTTGGAAGTGTTATCACTGCCAGGGATCGTTGGCTCAAACCTGGAGGTCTTATTCTACCTTCAAATGCATCGTTGTACATGGCTCCTGTAACTCATGCTGACCGATATAGTGAAAGCATTTACTTCTGGCAGAATGTCTATGGAATTGATATGTCTGCCATGATACCATTGGCAAAGCAGTGTGCATTTGAAGAACCTTCTGTGGAGACAATCGCAGGTGAAAATGTTTTGACATGGCCAAATGTGGTAAAACATGTAGATTGTTATTCAGTTACCATCCATGAGCTGGAGTCTGTTTCAGCTAGATTTGACTTCAAGTCAATGATGCGAGCACCGCTGCATGGTTTTGCATTTTGGTTTGATGTTGAATTTAATGGGCCTGCAACAACACCATCCAATTCTTTGTCTGCGGACAACCATCCAGTGGATGGTAGTCAGAGAAAAAAACGGCCAAATCCTAATGAAGTACTGGTCCTGTCCACCGCACCTGAAGACCTTCCAACACATTGGCAACAGACATTGATATACTTATATGAACCCATCGAAGTAGAGCAAGATCAATCTATTGAAGGTTCAGTGGAGCTGTCTCAAAGCAAAGAAAATCCTCGATTTATGAATGTTCACATTCAATATAACTCAGGTGGTCGATCCTATGTGAAAGAGTCTGTTATGAGATGA 1251 0.4452 MNSSPNYSNSNGYHRQQQQSSEMRFGMRHRERVRRGARRSRDSRDGAGSLRVSDQQQQHQYRPPCTDFDKAYFHSYAHVGIHEEMIKDRVRTETYRAAIMRHQSLIAGKVVVDVGCGTGILSIFCAQAGAKRVYAVDASDIALQAIEVVKANNLSDVVIVVHGRVEDIEIDEEVDVIISEWMGYMLLYESMLGSVITARDRWLKPGGLILPSNASLYMAPVTHADRYSESIYFWQNVYGIDMSAMIPLAKQCAFEEPSVETIAGENVLTWPNVVKHVDCYSVTIHELESVSARFDFKSMMRAPLHGFAFWFDVEFNGPATTPSNSLSADNHPVDGSQRKKRPNPNEVLVLSTAPEDLPTHWQQTLIYLYEPIEVEQDQSIEGSVELSQSKENPRFMNVHIQYNSGGRSYVKESVMR 416
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dere09g2313 416 MobiDBLite consensus disorder prediction 49 63 - -
Dere09g2313 416 FunFam Protein arginine N-methyltransferase 6 65 211 - -
Dere09g2313 416 MobiDBLite consensus disorder prediction 1 63 - -
Dere09g2313 416 CDD AdoMet_MTases 111 210 - -
Dere09g2313 416 PANTHER PROTEIN ARGININE N-METHYLTRANSFERASE 23 404 IPR025799 GO:0016274|GO:0018216
Dere09g2313 416 Pfam Ribosomal protein L11 methyltransferase (PrmA) 107 181 - -
Dere09g2313 416 MobiDBLite consensus disorder prediction 1 23 - -
Dere09g2313 416 FunFam Protein arginine N-methyltransferase 6 213 414 - -
Dere09g2313 416 Gene3D - 213 415 - -
Dere09g2313 416 ProSiteProfiles SAM-dependent methyltransferase PRMT-type domain profile. 69 416 IPR025799 GO:0016274|GO:0018216
Dere09g2313 416 MobiDBLite consensus disorder prediction 321 344 - -
Dere09g2313 416 Gene3D Vaccinia Virus protein VP39 66 211 IPR029063 -
Dere09g2313 416 SUPERFAMILY S-adenosyl-L-methionine-dependent methyltransferases 75 406 IPR029063 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dere09g2313 Dere-ChrDere09 34572829 34623697 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dere09g2313 72 383 C2H2 Transcription Factor Family AT3G12270 39.450 3.42e-65 217